WGS of bacteria used in a diverse Mock
A total of 227 genomes were sequenced using Illumina HiSeq 4000, as will serve as a baseline for benchmarking various metagenomics tools. In addition, 61 other genomes used for illustrating intra-species variability are also included.
- Acetobacter lovanie...
- Achromobacter aegri...
- Acidomonas methanolica
- Acinetobacter bauma...
- Actinomadura glauci...
- Aeriscardovia aerip...
- Aeromonas molluscorum
- Agathobacter rectalis
- Agrobacterium rubi
- Akkermansia mucinip...
- Alcaligenes faecalis
- Aliarcobacter troph...
- Alishewanella tabri...
- Anaerostipes caccae
- Ancylobacter pratis...
- Anoxybacillus flavi...
- Asaia krungthepensis
- Azospirillum brasil...
- Bacillus subtilis
- Bacteroides ovatus
- Bacteroides thetaio...
- Bhargavaea cecembensis
- Bifidobacterium ang...
- Bordetella bronchis...
- Bosea lupini
- Bradyrhizobium yuan...
- Brenneria salicis
- Brevibacillus brevis
- Brucella anthropi
- Burkholderia cenoce...
- Burkholderia cepacia
- Burkholderia lata
- Burkholderia multiv...
- Burkholderia stabilis
- Burkholderia vietna...
- Butyricicoccus pull...
- Campylobacter concisus
- Campylobacter fetus...
- Campylobacter ureol...
- Candidimonas nitror...
- Carnobacterium inhi...
- Chitinophaga terrae...
- Christiangramia ech...
- Chryseobacterium jo...
- Citrobacter youngae
- Clavibacter michiga...
- Clostridium perfrin...
- Collimonas pratensis
- Corynebacterium casei
- Crateriforma conspicua
- Cronobacter sakazakii
- Curtobacterium luteum
- Curvibacter delicatus
- Deinococcus humi
- Deinococcus radiodu...
- Delftia acidovorans
- Desulfovibrio desul...
- Dickeya chrysanthemi
- ELIXIR ENA
- Echinimonas agarily...
- Eilatimonas milleporae
- Endobacter medicaginis
- Enterobacter asburiae
- Enterococcus ureasi...
- Epilithonimonas lactis
- Faecalibacterium pr...
- Faecalicoccus pleom...
- Fimbriiglobus ruber
- Finegoldia magna
- Flavobacterium aqua...
- Formosa algae
- Fuscovulum blasticum
- Fusobacterium gastr...
- Fusobacterium nucle...
- Glaciimonas immobilis
- Gluconacetobacter a...
- Gluconobacter oxydans
- Granulibacter bethe...
- Haemophilus influenzae
- Halomonas ventosae
- Helicobacter fennel...
- Helicobacter pylori
- Herbidospora cretacea
- Humitalea rosea
- Klebsiella pneumoni...
- Kozakia baliensis
- Laceyella sacchari
- Lacticaseibacillus ...
- Lactiplantibacillus...
- Lactiplantibacillus...
- Lactiplantibacillus...
- Lactiplantibacillus...
- Lactiplantibacillus...
- Lactobacillus delbr...
- Lactobacillus delbr...
- Lactococcus piscium
- Leeuwenhoekiella ma...
- Lentilactobacillus ...
- Leuconostoc mesente...
- Limosilactobacillus...
- Listeria monocytogenes
- Lonsdalea quercina ...
- Lysobacter antibiot...
- Malaciobacter mytili
- Mammaliicoccus lentus
- Maricaulis parjimensis
- Marinilabilia salmo...
- Marinobacter algicola
- Marinobacterium cor...
- Marinomonas communis
- Martelella mediterr...
- Massilia timonae
- Megasphaera cerevisiae
- Meiothermus rufus
- Mesorhizobium thiog...
- Metasolibacillus me...
- Micrococcus luteus
- Micromonospora thawaii
- Microvirgula aerode...
- Moraxella canis
- Morganella morganii...
- Mycobacteroides sao...
- Nakamurella silvestris
- Neisseria flavescens
- Neoasaia chiangmaie...
- Neokomagataea thail...
- Nitratidesulfovibri...
- Nitrospirillum amaz...
- Novacetimonas hansenii
- Noviherbaspirillum ...
- Noviherbaspirillum ...
- Oceanicella actignis
- Oceanobacillus onco...
- Oligella ureolytica
- Paenalcaligenes hom...
- Paenibacillus elgii
- Pandoraea apista
- Pandoraea pnomenusa
- Pantoea agglomerans
- Paracidovorax cattl...
- Paracoccus baruchii
- Parageobacillus toebii
- Parapusillimonas gr...
- Pectinatus sp DSM 2...
- Pectobacterium caro...
- Pectobacterium caro...
- Peteryoungia aggregata
- Phaeobacter inhibens
- Phaseolibacter flec...
- Phocaeicola vulgatus
- Photobacterium phos...
- Pigmentiphaga kullae
- Polycyclovorans alg...
- Polynucleobacter co...
- Prevotella bivia
- Propionibacterium f...
- Pseudomonas aeruginosa
- Pseudoxanthomonas d...
- Psychrobacter luti
- Rahnella woolbeding...
- Ralstonia mannitoli...
- Rheinheimera chironomi
- Rhizorhapis suberif...
- Rhodanobacter fulvus
- Rhodococcus qingshe...
- Roseburia inulinivo...
- Roseimaritima ulvae
- Rosenbergiella nect...
- Roseomonas gilardii
- Saccharibacter flor...
- Salininema proteoly...
- Salmonella enterica...
- Serratia ficaria
- Serratia rubidaea
- Shewanella vesiculosa
- Simonsiella muelleri
- Simplicispira metam...
- Sinorhizobium saheli
- Sphingobium xanthum
- Sphingomonas melonis
- Sporosarcina globis...
- Staphylococcus devr...
- Staphylococcus haem...
- Staphylococcus inte...
- Stenotrophomonas rh...
- Streptococcus therm...
- Streptomyces albus ...
- Tabrizicola aquatica
- Tardiphaga robiniae
- Tatumella citrea
- Tetragenococcus osm...
- Thalassovita gelati...
- Thermoanaerobacteri...
- Tritonibacter scott...
- Truepera radiovictrix
- Vagococcus penaei
- Veillonella parvula
- Vibrio harveyi
- Vibrio pelagius
- Woodsholea maritima
- Xanthomonas populi
- Xylella fastidiosa ...
- Xylophilus ampelinus
- Yersinia enterocoli...
- Zymomonas mobilis
| Provenance | |
|---|---|
| Instrument | Illumina HiSeq 4000; ILLUMINA |
| Publisher | Blue-Cloud Data Discovery & Access service; ELIXIR-ENA |
| Publication Year | 2024 |
| OpenAccess | true |
| Contact | blue-cloud-support(at)maris.nl |
| Representation | |
|---|---|
| Discipline | Marine Science |
| Temporal Point | 2019-05-18T00:00:00Z |