21 datasets found

The Two Weeks in the World research project has resulted in a dataset of 3100 clinically relevant bacterial genomes with pertaining metadata, collected from 59 diagnostic units...

Central venous catheter-related bloodstream infection (CRBSI) is a huge public health concern with considerable impact on mortality and health costs. A three years observational...

Whole genome sequencing of bacterial isolates over a 1-year period from a hospital's intensive care units.

This project is funded by the UK National Institute for Health Research to set up a full-fledged Global Health Research Unit (GHRU) through a grant awarded to the cGPS (Centre...

The aim of the proposed research is to define the nature and frequency of transfer of antimicrobial resistance (AMR) genes between pathogenic and commensal bacteria within their...

This project is designed to uncover antimicrobial drug leads from human symbionts.

Culturable bacterial community associated with marine sponge Aplysina

For infants with weakened immune systems, formula milk and complementary foods are the primary sources of nutrition. However, the presence of various potential pathogenic...

<b>FDA-ARGOS project update</b> <p>FDA-ARGOS database updates may help researchers rapidly validate diagnostic tests and use qualified genetic sequences to...

This project is funded by the UK National Institute for Health Research to set up a full-fledged Global Health Research Unit (GHRU) through a grant awarded to the cGPS (Centre...

A total of 227 genomes were sequenced using Illumina HiSeq 4000, as will serve as a baseline for benchmarking various metagenomics tools. In addition, 61 other genomes used for...

Metagenomes containing bacteria from positive blood culture broths in patients with sepsis

http://www.sanger.ac.uk/resources/downloads/bacteria/staphylococcus-aureus.html This data is part of a pre-publication release. For information on the proper use of...

Miscellaneous bacterial isolates collected at six regional referral hospitals in Tanzania in 2020-2021. The "ESKAPE pathogen" isolates from this project were published in...

We have developed a bladder-specific bacterial reference database consisting of 1134 genomes to aid in genomic, functional, and experimental analyses of the human bladder...

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Advance the implementation of mNGS in pathogen diagnosis in clinics.

Bloodstream infection is a major cause of morbidity and mortality worldwide. Early pathogen detection and administration of appropriate antimicrobial therapy substantially...

Rapid detection of pathogens and antimicrobial resistance genes in ventilator-associated pneumonia in ICU by metagenomic nanopores sequencing