DNA metabarcoding of foliar fungal communities in an untreated vineyard

DOI

This sequence dataset (FASTQ format) was obtained by metabarcoding fungal communities of 20-days old leaves in an untreated vineyard located in INRA Vilenave d'Ornon (France). The ribosomal internal transcribed spacer region 1 (ITS1) was amplified with the ITS1F / ITS2 primer pair and sequenced on an Illumina MiSeq platform (v2 chemistry, 500 cycles). "M" samples were collected from leaves harboring symptoms of powdery mildew (Erysiphe necator), while "S" samples were collected from visually healthy leaves. "ZI" samples correspond to disease spots and "ZS" samples were taken from the healthy leaf blade of infected leaves. The "info_16S" caption is misleading, the sequences are fungal ITS sequences.

Identifier
DOI https://doi.org/10.15454/A24N4C
Metadata Access https://entrepot.recherche.data.gouv.fr/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.15454/A24N4C
Provenance
Creator Vacher, Corinne
Publisher Recherche Data Gouv
Contributor Vacher, Corinne
Publication Year 2020
Funding Reference INRA MEM metaprogramme
Rights etalab 2.0; info:eu-repo/semantics/openAccess; https://spdx.org/licenses/etalab-2.0.html
OpenAccess true
Contact Vacher, Corinne (INRA - Institut National de la Recherche Agronomique)
Representation
Resource Type Dataset
Format application/zip
Size 2991008838
Version 1.0
Discipline Agriculture, Forestry, Horticulture; Geosciences; Life Sciences; Ecology; Agricultural Sciences; Farming Systems; Microbial Ecology and Applied Microbiology; Biology; Omics; Plant Science