Bioinformatic scripts to analyze metabarcoding data of fungal communities associated with two grapevine varieties (Vitis vinifera ‘Regent’ and ‘Cabernet-Sauvignon’)

Dataset

DOI

This archive provides the bioinformatic scripts used to analyze a metabarcoding dataset (available at https://www.ncbi.nlm.nih.gov/bioproject/678415) representing foliar fungal communities associated with two grapevine varieties (Vitis vinifera ‘Regent’ and ‘Cabernet-Sauvignon’) inoculated with powdery mildew (Erysiphe necator) under various drought conditions. The raw and filtered ASV tables are provided in QIIME2 format and R phyloseq format. Summary statistics and interactive taxonomic plots (.qzv files) can be viewed in the QIIME2view interface.

Identifier
DOI	https://doi.org/10.15454/KMAU1G
Metadata Access	https://entrepot.recherche.data.gouv.fr/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.15454/KMAU1G

Provenance
Creator	Vacher, Corinne
Publisher	Recherche Data Gouv
Contributor	Vacher, Corinne
Publication Year	2021
Rights	etalab 2.0; info:eu-repo/semantics/openAccess; https://spdx.org/licenses/etalab-2.0.html
OpenAccess	true
Contact	Vacher, Corinne (INRA - Institut National de la Recherche Agronomique)

Representation
Resource Type	Dataset
Format	application/octet-stream; application/gzip; text/tab-separated-values; application/pdf
Size	347894; 207606; 214152; 153231; 13752; 100960; 505957; 1210226; 2575637; 1484745; 285889; 8327
Version	1.0
Discipline	Geosciences; Life Sciences; Plant Science; Biology; Omics; Microbial Ecology and Applied Microbiology; Ecology