Viral metagenomic and fungal ITS metabarcoding data from complex pools of plant samples from southwestern France and for pools of fungal cultures obtained from these plant pools

DOI

Using cross-disciplinary approaches to characterize the plant core microbiome, we assessed the diversity and composition of leaf-associated fungal and viral communities from composite samples of wild herbaceous plants in different ecological contexts. In total, 32 libraries were prepared from purified dsRNAs for virome analysis which were sequenced on an Illumina HiSeq 3000 system at the GenoToul platform (INRA Toulouse, France). In addition, 96 barcode libraries were prepared for ITS1 and ITS2 amplicons and sequenced on an Illumina MiSeq sequencer at the Bordeaux Genome Transcriptome Facility (INRA – Pierroton, France).

Identifier
DOI https://doi.org/10.15454/X23KJF
Metadata Access https://entrepot.recherche.data.gouv.fr/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.15454/X23KJF
Provenance
Creator Ma, Yuxin; Fort, Tania; Marais, Armelle; Lefebvre, Marie; Theil, Sebastien; Candresse, Thierry
Publisher Recherche Data Gouv
Contributor Candresse, Thierry
Publication Year 2019
Rights etalab 2.0; info:eu-repo/semantics/openAccess; https://spdx.org/licenses/etalab-2.0.html
OpenAccess true
Contact Candresse, Thierry (INRA - Institut National de la Recherche Agronomique)
Representation
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Version 1.0
Discipline Life Sciences; Microbial Ecology and Applied Microbiology; Biology; Omics; Plant Science