404 datasets found

High-throughput sequencing of DNA amplicons (metabarcoding) is potentially a rapid and cost-effective method to monitor larvae for management and environmental impact assessment...

golden pompano intestinal microbiota

Northern populations of Arctic char (Salvelinus alpinus) can be anadromous, migrating annually from the ocean to freshwater lakes and rivers in order to escape sub-zero...

The study aims at comparing circulating bacterial microbiome from two halibut species located in the bottom of the Gulf of St-Lawrence. The results will give us a first...

In this work, we collected turbot samples from farmed ponds with ED and healthy samples to understand changes in the ocular microbiota of turbot suffering from ED. We compared...

Aquaculture plays a major role in the coastal economy of the Mediterranean Sea. This raises the issue of the impact of fish cages on the surrounding environment. Here we explore...

Atlantic salmon is a valuable aquaculture species that requires both fresh and seawater to complete its life cycle and the transition of fish between these two habitats is often...

The DNA-seq in water amplified by MiFish primer

eDNA Metabarcoding of sterivex filtered marine water samples in order to identify fish biodiversity in the Black Sea

This is part of Morisatoumi (Connectivity of Hills, Humans and Oceans) project : investigation of 32 rivers. We used environmental DNA for fish diversity survey and also...

12S rRNA gene partial sequence of marine teleost in the Yellow RIVER Estuary

This project applied 16S rRNA amplicon and metagenomic sequencing to eleven mesopelagic animal species to assess the composition and functional potential of their microbiomes.

Raw reads of the Southern gulf of St. Lawrence Atlantic cod's circulating microbiome. 16S RNA gene was target on the V3-V4 region using 341F and 805R primers. The goal was to...

This study applied a 18S-V9 and 12S metabarcoding approach on eDNA seawater samples collected over two years (2020-2021) along the Campania coast (Italy) to investigate...

In this study, mucilage samples taken from Bandirma Bay are subjected to eDNA metabarcoding by using 16S ribosomal RNA and 18S ribosomal RNA regions to identify bacterial and...

Comparison of teleo and miFish barcodes

Atl salmon study ABSTRACT Successful rearing of fish in hatcheries is critical for conservation, recreational fishing, and commercial fishing through wild stock enhancements,...

The emergence of infectious agents poses a continual economic and environmental challenge to aquaculture production, yet the diversity, abundance and epidemiology of aquatic...

The main objectives of this study are: (i) to analyze the microbiota associated to epidermal mucus from European eel and (ii) to identify the reservoir of virulence genes from...

Metatranscriptomics &amp metabarcoding of Platax orbicularis skin microbiome