Viral metagenomic data of crop and wild plant/weed species in horticultural contexts: analysis of viral diversity, prevalence and stability over a two-year period

Dataset

DOI

Using purified double-stranded RNAs (dsRNAs) and high-throughput sequencing (HTS) on a 454 pyrosequencing platform, we analyzed the metavirome associated with crops and surrounding weeds/wild plants in horticultural contexts in southwestern France. A total of 165 libraries were prepared and sequences. One additional file provides the samples identity and metadata.

Identifier
DOI	https://doi.org/10.15454/5BLYMJ
Metadata Access	https://entrepot.recherche.data.gouv.fr/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.15454/5BLYMJ

Provenance
Creator	Ma, Yuxin; Marais, Armelle; Theil, Sebastien; Lefebvre, Marie; Svanella-Dumas, Laurence; Faure, Chantal; Bergey, Bernard; Candresse, Thierry
Publisher	Recherche Data Gouv
Contributor	Candresse, Thierry
Publication Year	2019
Rights	etalab 2.0; info:eu-repo/semantics/openAccess; https://spdx.org/licenses/etalab-2.0.html
OpenAccess	true
Contact	Candresse, Thierry (INRA - Institut National de la Recherche Agronomique)

Representation
Resource Type	Dataset
Format	text/tab-separated-values; application/gzip
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Version	1.0
Discipline	Life Sciences; Biology; Omics; Plant Science