We used a hypergeometric test within the FUNC program (Prüfer et al., 2007) to determine whether certain GO terms assigned via InterproScan annotation were significantly enriched in M. incognita :
- PPN-specific proteins
- PPN-specific putative secreted proteins (PSP)
- PPN-specific Candidate effectors
- Possible horizontal gene transfers (Alien Index >0)
- Candidate horizontal gene transfers (Alien index >14)
compared to the rest of the proteins in this species.
We used a false discovery rate (FDR) threshold value of 0.05 to consider a term as significantly enriched.