29 datasets found

Sequencing of several clinical isolates of different species

Challenges in cultivating microorganisms have limited the phylogenetic diversity of currently available microbial genomes. This is being addressed by advances in sequencing...

The important role of mice as a model in research of microbe host interactions increased the need for determining the limits of such experiments due to host specificity and...

Metagenomes containing bacteria from positive blood culture broths in patients with sepsis

Multi-drug resistant gram negative bacteria (also known as “Superbugs”) are causing infections in vulnerable patients in hospitals around the world. Much of the clinically...

The Two Weeks in the World research project has resulted in a dataset of 3100 clinically relevant bacterial genomes with pertaining metadata, collected from 59 diagnostic units...

Whole-genome sequencing of bacterial isolates as part of WPHL's surveillance effort

CDC Division of Healthcare Quality Promotion’s BioProject for whole genome sequence data of Gram-negative bacteria

Whole genome sequencing of bacterial isolates over a 1-year period from a hospital's intensive care units.

Prospective collection and sequencing of positive blood culture isolates in hospitalized adults in Cambodia

Fastq files for HAI bacteria sequenced at the Nevada State Public Health Lab

Vibrio parahaemolyticus isolated from shrimp pond

Whole genome analysis of multidrug-resistant, extended-spectrum beta-lactamase-producing bacteria isolated from dogs

The level of antibiotic resistance in neonatal infections and its impact on mortality in low-middle income countries (LMICs) is unacceptably high. The study, entitled the Burden...

The aim of the proposed research is to define the nature and frequency of transfer of antimicrobial resistance (AMR) genes between pathogenic and commensal bacteria within their...

We have developed a bladder-specific bacterial reference database consisting of 1134 genomes to aid in genomic, functional, and experimental analyses of the human bladder...

http://www.sanger.ac.uk/resources/downloads/bacteria/ This data is part of a pre-publication release. For information on the proper use of pre-publication data shared by the...

The object of this study is to explore the association between maternal gut microbiota and risk of congenital heart disease in offspring, as well as the possible mechanisms...

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