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Comparison between diploid and triploid liver tissue from coho salmon using R...
The goal of this project was to characterize gene expression differences between diploid and triploid liver samples from coho salmon. In an evolutionary context, this... -
Oncorhynchus kisutch Transcriptome or Gene expression
Oncorhynchus kisutch transcriptome -
Sequencing the male coho salmon (Oncorhynchus kisutch) genome
This project was developed to compliment the existing coho genome assembly (BioProject: PRJNA352719), and to add male-specific sequence. We sequenced the genome of a male coho... -
Oncorhynchus kisutch gonad transcriptomes
Gene expression in Coho salmon immature testis and immature ovary -
Coho salmon selective breeding at Miyagi Pref. Japan
Raw ddRAD-seq reads collected from 182 individuals of the selected and non-selected populations of Coho salmon reared in Miyagi Pref. Japan. -
Improving Metabarcoding Taxonomic Assignment: A Case Study of Fishes in a Lar...
Reference Barcodes for California Current Large Marine Ecosystem Fishes generated using the MiFish 12S Universal and Elasmobranch primer sets. Both vouchered and unvouchered... -
Parallel epigenetic modifications induced by hatchery rearing in a Pacific Sa...
To test the hypothesis that specific epigenetic variations are associated with captivity, we compared the genome-wide pattern of methylation in hatchery-reared Coho Salmon... -
Nanopore genetic stock identification coho salmon
We develop and test a method for at-sea stock identification of coho salmon Oncorhynchus kisutch based on targeted SNP amplicon sequencing on the minION platform during the... -
Transcriptome and whole genome methylation of coho salmon liver tissue under ...
Liver tissue was collected from size-matched non-transgenic (~19 months old) and transgenic (~6 months old) coho salmon (Chehalis River) before treatment, after feed-deprivation... -
Coho Salmon WGBS
WGBS (Whole Genome Bisulfit Sequencing) of the milt of 24 Coho Salmon individuals from two distinct rivers in British Columbia (Quinsam and Conuma). SUB10971131 -
Comparable immune responses of Oncorhynchus kisutch to growth rate
The purpose of this project is to understand how the growth hormone (GH) transgenesis and nutrition affect the transcriptomic responses to immune stimulation in coho salmon. -
Oncorhynchus kisutch Raw sequence reads
RNA-Seq from the paired caudal fin and liver tissue of genetically-sexed male and female coho salmon smolt after exposure to a seawater control or the seawater accomodated... -
Linkage disequilibrium estimation in Coho salmon
The aim of the study was to estimate the linkage disequilibrium and effective population size of a commercial coho salmon breeding population -
Whole Genome Resequencing of aquaculture strains of coho salmon
Whole genome resequencing of several aquaculture strains of coho salmon and wild stocks from which the strains were developed from. This was part of the Enhancing Production in... -
Hatchery and Wild Coho Within Generation Selection
Pooled sequencing project designed to investigate selection within a single generation in hatchery and wild coho salmon, to support production and conservation goals -
RNA-Seq of liver tissue samples from northern pike (Esox lucius), coho salmon...
The aim of this sequencing experiment was to make available liver tissue expression for selected fish species, northern pike (Esox lucius, Eluc), coho salmon (Oncorhynchus... -
6PPD-quinone exposure in coho salmon embryos
6PPD is a ubiquitous additive to car tires to extend service life, and 6PPD-quinone is a recently described transformation product with high acute lethality in coho salmon. The... -
Sequencing the Coho salmon (Oncorhynchus kisutch) genome
Coho (Oncorhynchus kisutch) is a culturally and economically important salmon species that spawns across the coastline of the Northern Pacific ocean. However, wild Coho salmon... -
Whole Genome Resequencing in Coho salmon
We performed whole genome resequencing on 60 samples of coho salmon (Oncorhynchus kisutch), each on a single lane of Illumina HiSeq2500 PE125. Sampling was divided into 5... -
Genotype-by-environment, stream and tank environments, transgenic and non-tra...
The goal of this study was to identify the underlying mechanisms of a growth genotype-by-environment interaction seen between transgenic and non-transgenic coho salmon in stream...