An economical and highly adaptable optogenetics system for individual and population-level manipulation of Caenorhabditis elegans

DOI

This dataset contains the raw imaging files of the following study.

Background: Optogenetics allows the experimental manipulation of excitable cells by a light stimulus without the need for technically challenging and invasive procedures. The high degree of spatial, temporal and intensity control that can be achieved with a light stimulus, combined with cell type-specific expression of light-sensitive ion channels, enables highly specific and precise stimulation of excitable cells. Optogenetic tools have therefore revolutionized the study of neuronal circuits in a number of models, including Caenorhabditis elegans. Despite the existence of several optogenetic systems that allow spatial and temporal photoactivation of light-sensitive actuators in C. elegans, their high costs and low flexibility have limited wide access to optogenetics. Here, we developed an inexpensive, easy-to-build, modular and adjustable optogenetics device for use on different microscopes and worm trackers, which we called the OptoArm.

Results: The OptoArm allows for single- and multiple-worm illumination and is adaptable in terms of light intensity, lighting profiles and light-color. We demonstrate the OptoArm′s power in a population-based multi-parameter study on the contributions of motor circuit cells to age-related motility decline. We found that individual components of the neuromuscular system display different rates of age-dependent deterioration. The functional decline of cholinergic neurons mirrors motor decline, while GABAergic neurons and muscle cells are relatively age-resilient, suggesting that rate-limiting cells exist and determine neuronal circuit aging.

Conclusion: We have assembled an economical, reliable and highly adaptable optogenetics system which can be deployed to address diverse biological questions. We provide a detailed description of the construction as well as technical and biological validation of our set-up. Importantly, use of the OptoArm is not limited to C. elegans and may benefit studies in multiple model organisms, making optogenetics more accessible to the broader research community

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Identifier
DOI https://doi.org/10.34894/89DM6O
Related Identifier https://doi.org/10.1101/2021.03.19.435933
Metadata Access https://dataverse.nl/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.34894/89DM6O
Provenance
Creator Koopman M. ORCID logo; Janssen L. (ORCID: 0000-0002-1973-304X); Nollen E.A.A. ORCID logo
Publisher DataverseNL
Contributor Digital Competence Centre
Publication Year 2021
Rights CC0 Waiver; info:eu-repo/semantics/openAccess; https://creativecommons.org/publicdomain/zero/1.0/
OpenAccess true
Contact Digital Competence Centre (University of Groningen)
Representation
Resource Type experimental imaging data; Dataset
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Version 1.0
Discipline Life Sciences; Medicine