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Fluorescence intensity datasets and R scripts to predict allelic frequencies ...
R scripts and fluorescence intensity datasets of 24 controlled pools and 327 inbred lines panels extracted from 50K Illumina Infinium HD array (Ganal et al., 2010). These... -
Amaizing Dent Panel Genotyping Dataset (354 Public Lines)
Genotyping matrix of a collection of 354 dent maize inbred lines corresponding to the "Public Amaizing Dent Panel". This panel includes: (i) 254 dent inbred lines from "Drops... -
Differential Adaptation of Propionibacterium freudenreichii CIRM-BIA to cow's...
Propionibacterium freudenreichii adaptation to cow milk versus soymilk environments was studied thanks to proteomics. Bacteria were harvested at the begining of stationary... -
Taxonomic distribution of M. incognita Diamond hits against the NCBI's nr lib...
Taxonomic distribution of M. incognita Diamond hits against the NCBI's nr library. The taxonomy has been determined by Diamond LCA algorithm via outformat 102. Two reports are... -
Milk Lipidomic in cows and goats
These data report milk composition in triacylglycerides and polar lipids of cows and goats fed different lipid-supplemented diets, and analyzed by LC-Mass spectrometry. -
Protocoles pour l'analyse des diatomées par métabarcoding
Projet Diat ADN Transfert Transfert vers l’opérationnel de l’outil « diatomées ADN » pour le contrôle de la qualité des milieux aquatiques Livrable : Outils pédagogiques pour... -
The discernible and hidden effects of clonality on the genotypic and genetic ...
Partial clonality is widespread across the tree of life, but most population genetics models are designed for exclusively clonal or sexual organisms. This gap hampers our... -
TE polymorphisms detection and analysis
This dataset contains i) output files from "Kozlowski D. 2020a. Transposable Elements prediction and annotation in the M. incognita genome. Portail Data INRAE [Internet].... -
1D 1H-NMR profiling of wheat samples
NMR metabolomic profiling of wheat samples recorded on three sites (JEOL400, Bruker 500 and Bruker 600 MHz) - To be used with NMRProcFlow (https://nmrprocflow.org) -
Transposable Elements prediction and annotation in the M. incognita genome
This datasets contains all the essential files produced during the TE prediction, annotation, and post-processing in the M. incognita genome (e.g. TE consensus library, TE... -
Genotypic description of the near isogenic lines (HIFs) used for QTL validati...
Each row represents a single HIF and the genotype of the F7 RIL it originates from is indicated along the chromosomes with RIL ID, markers and genotypic conventions from... -
TE-related genes: annotation, characterisation, and expression.
This dataset contains the gene analysis workflow used to evaluate the genes expression and to find the genes potentially involved in the TEs transposition machinery. Also, it... -
PlantSyntenyViewer Brassicaea submission file
Submission file of Brassicaea botanic family (8 proto-chromosomes) in PlantSyntenyViewer -
Annotation data about Multi Criteria Assessment Methods used in Animal Geneti...
This data article contains annotation data characterizing Multi Criteria Assessment Methods proposed in the scientific literature by INRA researchers belonging to the Animal... -
Dataset for genetic and transcriptome variation of ovary tomato response to h...
Six tomato accessions with contrasted responses to high temeprature (HT) were selected and the ovary transcriptomes of plants grown under HT and control conditions were analyzed... -
M. incognita candidate effector proteins
Accession numbers of M. incognita candidate effectors. These proteins are predicted to be secreted based on the presence of a signal peptide for secretion and absence of... -
New insights into homoeologous copy number variations in the hexaploid wheat ...
Bread wheat is an allohexaploid species originating from two successive and recent rounds of hybridization between three diploid species that were very similar in terms of... -
QTL mapping of modeled metabolic fluxes reveals gene variants impacting yeast...
The yeast Saccharomyces cerevisiae is an attractive industrial host for the production of a wide range of bulk and fine chemicals, such as biofuels, flavors and fragrances or... -
1D 1H-NMR profiling of 8 fleshy fruits (mixed-stage samples)
1D 1H-NMR metabolomic profiling of 8 fleshy fruit species, including three herbaceous species, eggplant, pepper and cucumber, three tree species, apple, peach and clementine,... -
Replication data for: "Characterization of bacterial communities of cold-smok...
Information data on the diversity of bacterial communities present on 45 samples of cold-smoked salmon produced in 3 different food processing plants and cold-smoked salmon...