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Microbial community structure analysis in high radiation environments
To analyze the microbial community structures in the highly radioactive environments after the Fukushima Daiichi Nuclear Power Plant accident, meta-16S amplicon analyses were... -
whitefish intestinal microbiota and the water bacterial communities
It is well established that symbionts have considerable impact on their host, yet the investigation of the possible role of the holobiont in the host’s speciation process is... -
eDNA metabarcoding read counts correlate to fish biomass/abundance
Read counts from eDNA metabarcoding accurately reflect fish abundance in fishery holding ponds with known fish biomass and number of individuals. Our findings also demonstrate... -
Subtropical freshwater microbial and viral metagenome
The scope and purpose of this project is to investigate impacts on the microbial and viral community by large climate activity (subtropical storm). Moreover, we want to test the... -
surface metagenome Metagenomic assembly
Effect of waste substances on microbial structure in surface water -
Effects of Fecal Input, Environmental Conditions, and Environmental Sources o...
To determine major factors influencing enterococci concentrations seen in an estuary and marine beach setting. More specifically delineating fecal input, environmental... -
Metagenomic approach revealed the co-occurrence and transmission of antibioti...
Collecting samples from different environments (including fish, ponds, etc.), using metagenomic techniques revealed the coexistence and spread of antibiotic resistance groups in... -
Comparing shotgun vs. amplicon sequencing analysis of environmental samples o...
New applications of DNA and RNA sequencing are expanding the field of biodiversity discovery and ecological monitoring, yet questions remain regarding precision and efficiency.... -
Global patterns of 16S rRNA diversity at a depth of millions of sequences per...
The ongoing revolution in high-throughput sequencing continues to democratize the ability of small groups of investigators to map the microbial component of the biosphere. In... -
Soil microbiome in Florida Coastal Everglades at different depths
The 16S rRNA gene sequencing of core sediment soil at different depth from Florida Coastal Everglades -
Bacterial dynamics within a drinking water distribution system
Investigation of microbial dynamics within a full-scale drinking water distribution network using a novel micPCR/NGS monitoring approach. -
Warmwater fish species of Upper. St Lawrence River Raw sequence reads
We sought to discern food web patterns in coastal bays/wetlands in the Upper St. Lawrence River. We collected three species of fish and parallel water and zooplankton (e.g.... -
freshwater metagenome Raw sequence reads
The goal of the study is to prove that the nucleic acids of water samples could be in situ extracted and preserved by MISNAC apparatus for subsequent molecular work -
Knight skin biogeography comparison
Knight_skin_biogeography - Comparison of skin samples from a rat (mammal), cyclostomid (fish), iguana (reptile), bull frog (amphibian) and a bird (pigeon) to determine if the... -
water plasmids metagenome
the plasmidome sequencing data of 14 water samples enriched with substrate -
Freshwater river and lake Raw sequence reads
Investigation of bactieral diversity habitating freshwater river and lake, China -
Spatiotemporal dynamics and ecological drivers of bacterioplankton and archae...
Free-living and particle-associated bacterial and archaeal communities play critical roles in nutrient cycles, metabolite production, and as a food source in aquatic systems,... -
Mu-DNA: a modular universal DNA extraction method adaptable for a wide range ...
Efficient DNA extraction is fundamental to molecular studies. However, commercial kits are expensive when a large number of samples need to be processed. Here we present a... -
Exploring microbial life in the Antarctica Dry Valley lakes
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Intracellular nitrate storage by diatoms across aquatic habitats and climate ...
Diatom community composition of marine and freshwater ecosystems. We used these data to determine potential relations of intracellular nitrate storage of Diatoms and their...