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Clinical isolate sequencing
Sequencing of several clinical isolates of different species -
Recovery of nearly 8,000 uncultivated bacterial and archaeal genomes substant...
Challenges in cultivating microorganisms have limited the phylogenetic diversity of currently available microbial genomes. This is being addressed by advances in sequencing... -
The mouse intestinal bacterial collection (miBC) represents a unique resource...
The important role of mice as a model in research of microbe host interactions increased the need for determining the limits of such experiments due to host specificity and... -
Metagenomes containing bacteria from positive blood culture broths in patient...
Metagenomes containing bacteria from positive blood culture broths in patients with sepsis -
Genome sequencing of KPC-producing Gammaproteobacteria
Multi-drug resistant gram negative bacteria (also known as “Superbugs”) are causing infections in vulnerable patients in hospitals around the world. Much of the clinically... -
Two weeks in the World 2020
The Two Weeks in the World research project has resulted in a dataset of 3100 clinically relevant bacterial genomes with pertaining metadata, collected from 59 diagnostic units... -
Bacterial WGS: Wyoming Public Health Laboratory, Wyoming, USA
Whole-genome sequencing of bacterial isolates as part of WPHL's surveillance effort -
CDC HAI-Seq Gram-negative bacteria
CDC Division of Healthcare Quality Promotion’s BioProject for whole genome sequence data of Gram-negative bacteria -
Bacterial isolates from intensive care units
Whole genome sequencing of bacterial isolates over a 1-year period from a hospital's intensive care units. -
Enterobacterales, Acinetobacter spp, Burkholderia spp, Pseudomonas spp, Steno...
Prospective collection and sequencing of positive blood culture isolates in hospitalized adults in Cambodia -
NSPHL HAI WGS raw reads
Fastq files for HAI bacteria sequenced at the Nevada State Public Health Lab -
Vibrio parahaemolyticus isolated from shrimp pond
Vibrio parahaemolyticus isolated from shrimp pond -
Whole genome analysis of multidrug-resistant, extended-spectrum beta-lactamas...
Whole genome analysis of multidrug-resistant, extended-spectrum beta-lactamase-producing bacteria isolated from dogs -
Genomic epidemiology and patterns of antimicrobial resistance of neonatal sep...
The level of antibiotic resistance in neonatal infections and its impact on mortality in low-middle income countries (LMICs) is unacceptably high. The study, entitled the Burden... -
Tracking_the_dynamics_of_AMR_genes_within_enteric_bacterial_communities_in_pi...
The aim of the proposed research is to define the nature and frequency of transfer of antimicrobial resistance (AMR) genes between pathogenic and commensal bacteria within their... -
Genomic Catalog of Human Bladder Bacteria
We have developed a bladder-specific bacterial reference database consisting of 1134 genomes to aid in genomic, functional, and experimental analyses of the human bladder... -
HPACC_Murray_project
http://www.sanger.ac.uk/resources/downloads/bacteria/ This data is part of a pre-publication release. For information on the proper use of pre-publication data shared by the... -
16S rDNA sequencing
The object of this study is to explore the association between maternal gut microbiota and risk of congenital heart disease in offspring, as well as the possible mechanisms...