Evaluation of Rad-seq genotyping to identify loci under selection for guppies living in rivers heavily polluted with crude oil.

In some very recent work we examined for evidence of adaptation in P. reticulata living in rivers in Southern Trinidad heavily polluted with typical petrogenic hydrocarbons including numerous branched alkylnaphthalenes (BANs) and toxic PAHs i.e. branched alkylbenzenes (BABs) derived from crude oil. Here we evaluate the loci under selection using RAD-seq analysis, using the restriction enzyme Sbf1. We genotype 8 fish from an extremely polluted river stretch in southern Trinidad and another 8 from a clean river stretch in the north of the country.

Identifier
Source https://data.blue-cloud.org/search-details?step=~01268E0AB65891895DD80C73675ECB5AD2AA7B43F9F
Metadata Access https://data.blue-cloud.org/api/collections/68E0AB65891895DD80C73675ECB5AD2AA7B43F9F
Provenance
Instrument Illumina HiSeq 3000; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Temporal Point 2016-07-07T00:00:00Z