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Extensive variation in germline de novo mutations in Poecilia reticulata
Three guppy pedigree data, each pedigree includes parents and 10 offspring, whole-genome resequencing on Illumina NovaSeq 4000 -
Poecilia reticulata Transcriptome or Gene expression
Fish display a variety of behaviours associated with sexual reproduction and these can be disrupted by exposure to environmental estrogens such as ethinyl estradiol. In order to... -
Mapping of blond of the guppy using ddRADseq
The spontaneous mutant blond of the guppy, Poecilia reticulata, was mapped using ddRADseq in combination with QTL mapping. We used a mapping cross comprised of 134 F2... -
Poecilia reticulata strain:QuareII Transcriptome or Gene expression
This study was performed to assemble a reference transcriptome from embryos and organs of adult guppies. The reference assembly was further used to identify genes with... -
PCR-free WGS sequencing of Maculatus and Guanapo P. reticulata strains
PCR-free WGS sequencing of 2 guppy (Poecilia reticulata) individuals was performed: a XY female from the Maculatus strain and a XY male from the Guanapo strain. -
Germline mutation rate in guppies
Germline mutation rate in guppies -
Transcriptome of selected lines for high and low sperm production of males of...
We combined artificial selection for sperm production with RNA-Seq sequncing using Poecilia reticulata, a fish characterized by intense sperm competition, to investigate... -
RNA-seq analysis of the guppy immune response against Gyrodactylus bullatarud...
Gyrodactylids are ubiquitous ectoparasites of teleost fish, but our understanding of the host’s immune response against them is fragmentary. Here, we used RNA-seq to investigate... -
Poecilia reticulata Raw sequence reads
Examine the genetic trajectory of tail color expression in male guppies across three developmental stages. -
Poecilia reticulata strain:Paria Transcriptome or Gene expression
Compare brain gene expression of females exposed to novel or familiar male color patterns -
Guppy small RNA
small RNA fastq for Trinidadian guppy, includes 51 samples whole brain small RNA reads -
Divergence and Remarkable Diversity of the Y Chromosome in Guppies
The guppy sex chromosomes show an extraordinary diversity in divergence across populations and closely related species. In order to understand the dynamics of the guppy Y... -
Using an F2 QTL breeding cross design, we examine the genetic basis of seven ...
Guppy life history traits evolve rapidly and convergently among natural high- (HP) and low-predation (LP) environments in northern Trinidad. This system has been studied... -
Poecilia reticulata optic tectum and telencephalon transcriptome
Guppy (Poecilia reticulata) optic tectum and telencephalon transcriptome. Sequenced to identify the neurogenomic response of female preferences in guppy females with different... -
Poecilia reticulata whole-genome resequencing
We study diversity, recombination and selection in wild guppy populations, using whole-genome DNA resequencing data of wild and laboratory fish. -
Population genomics of convergent evolution in high-predation and low-predati...
Population genomics of convergent evolution in high-predation and low-predation guppies. Study includes WGS data from 6 populations from 3 rivers in Trinidad (Aripo, Tacarigua,... -
Poecilia reticulata Raw sequence reads
normal RNA-seq of Poecilia reticulata -
Guppy (Poecilia reticulata) brain gene expression (treated with Ritalin or co...
This dataset is part of a large, trans-generational study investigating the role that manipulation of a neural pathway, specifically the pathway of the neurotransmitter... -
Poecilia reticulata and Poecilia wingei Transcriptome
RNA-seq data from Poecilia reticulata and Poecilia wingei families. -
Guppy domestication MHC
Genotyping guppy MHC alleles and supertypes to look at effect of domestication on MHC diversity and parasite resistance