Phenotypes and genotypes of two commercial rainbow trout French populations for resistance to Flavobacterium psychrophilum

DOI

This dataset supports a study on the genetic architecture of resistance to bacterial cold-water disease (BCWD), caused by Flavobacterium psychrophilum, in two French commercial populations of rainbow trout (Oncorhynchus mykiss) in France. The fish were experimentally infected via a standardized waterborne infection model, and survival was monitored for 29 days post-infection. Phenotypic data include binary survival status (alive/dead) either at 10 (Population A) or 29 dpi (Populations A and B). Genotypes were obtained using both medium-density (57K SNPs) and high-density (665K SNPs) Axiom™ arrays. A total of 1148 offspring from Population A and 1038 offspring from Population B were phenotyped and genotyped. The study aimed to identify quantitative trait loci (QTLs) associated with BCWD resistance.

Identifier
DOI https://doi.org/10.57745/WV8XJY
Metadata Access https://entrepot.recherche.data.gouv.fr/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.57745/WV8XJY
Provenance
Creator Pouil, Simon
Publisher Recherche Data Gouv
Contributor Pouil, Simon; Entrepôt Recherche Data Gouv
Publication Year 2025
Rights etalab 2.0; info:eu-repo/semantics/openAccess; https://spdx.org/licenses/etalab-2.0.html
OpenAccess true
Contact Pouil, Simon (INRAE)
Representation
Resource Type Dataset
Format application/pdf
Size 75019
Version 1.0
Discipline Agriculture, Forestry, Horticulture; Life Sciences; Agricultural Sciences; Agriculture, Forestry, Horticulture, Aquaculture; Agriculture, Forestry, Horticulture, Aquaculture and Veterinary Medicine; Aquaculture; Medicine