16S RNA metabarcoding dataset from microbiota of Label Rouge broiler carcass rinses

DOI

The dataset provides information on the bacterial composition of 465 Label Rouge broiler carcasses collected in a French slaughterhouse between september 2023 and february 2024. Carcasses were cuted in halves and 16S rRNA metabarcoding sequencing was performed before and after 7 days of storage at 4°C (on the two half of the same carcasse). Carcass rinses were pooled in groups of three to create one sample, resulting in a total of 310 sequenced samples. Amplicons from the region V3-V4 of 16S rRNA were sequenced with Illumina MiSeq technology. The aim of collecting these carcass microbial diversity data was to characterize bacterial species that are positively or negatively correlated with Campylobacter on fre-range chicken meat.

Identifier
DOI https://doi.org/10.57745/OGBIIU
Metadata Access https://entrepot.recherche.data.gouv.fr/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.57745/OGBIIU
Provenance
Creator Hautefeuille, Sophie ORCID logo; Haddad, Nabila ORCID logo; Guillou, Sandrine ORCID logo; Tareb, Raouf ORCID logo; Misery, Boris ORCID logo; Bouju-Albert, Agnès ORCID logo; Laroche, Béatrice (ORCID: 0000-0001-7821-332X)
Publisher Recherche Data Gouv
Contributor Hautefeuille, Sophie; SeCurité des ALIments et Microbiologie; Entrepôt Recherche Data Gouv
Publication Year 2025
Funding Reference Agence nationale de la recherche ANR-21-CE21-0008
Rights etalab 2.0; info:eu-repo/semantics/openAccess; https://spdx.org/licenses/etalab-2.0.html
OpenAccess true
Contact Hautefeuille, Sophie (SECALIM ; INRAE, ONIRIS)
Representation
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Version 1.0
Discipline Agriculture, Forestry, Horticulture; Life Sciences; Agricultural Sciences; Agriculture, Forestry, Horticulture, Aquaculture; Agriculture, Forestry, Horticulture, Aquaculture and Veterinary Medicine; Food Safety; Medicine