Transcriptome analysis of Lepeophtheirus salmonis strains

Total RNA was isolated from 16 adult male salmon lice of the drug susceptible strain IoA-00 and the multi-resistant strain IoA-02, using the Trizol protocol described in 2.7. Total isolated RNA was quantified by using Qubit 2.0 Fluorometer and Qubit RNA BR Assay Kit (Invitrogen, Thermo Fisher Scientific, UK). Quality of isolated total RNA was determined by UV spectrophotometry using a ND-1000 NanoDrop® (Thermo Scientific, UK) and Agilent Bioanalyzer system (Agilent Technologies, CA, USA). RNA integrity was assessed by electrophoresis using 100 ng of denaturized total RNA in a 1% agarose gel stained with ethidium bromide. Total mRNA of each individual was sequenced on an Illumina Novaseq 6000 platform at Novogene (Cambridge, United Kingdom).

Identifier
Source https://data.blue-cloud.org/search-details?step=~0124225F33D46CF7230F3435659D4832CE54D24C9B1
Metadata Access https://data.blue-cloud.org/api/collections/4225F33D46CF7230F3435659D4832CE54D24C9B1
Provenance
Instrument HiSeq X Ten; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Contributor Institute of Aquaculture;University of Stirling;Stirling;UK;IOA
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Temporal Point 2013-03-12T00:00:00Z