Seawater carbonate chemistry and oyster holobiont response to acidification and hypoxia

DOI

The data set is composed of data measured from an experiment involving exposing oyster holobiont to acidification and hypoxia. We aimed to understand the physiological trade-offs involved in oysters based on their exposure to stressful environments and how the microbial community associated with the oysters will also respond. We also measure changes in nutrient processing capability of the holobiont by measuring changes in nutrient concentrations.

In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2022) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation by seacarb is 2023-09-06.

Identifier
DOI https://doi.org/10.1594/PANGAEA.963471
Related Identifier IsSupplementTo https://doi.org/10.3389/fevo.2023.1083315
Related Identifier IsDerivedFrom https://doi.org/10.25442/HKU.22717084.V1
Related Identifier IsDocumentedBy https://cran.r-project.org/web/packages/seacarb/index.html
Metadata Access https://ws.pangaea.de/oai/provider?verb=GetRecord&metadataPrefix=datacite4&identifier=oai:pangaea.de:doi:10.1594/PANGAEA.963471
Provenance
Creator Hemraj, Deevesh Ashley ORCID logo; Falkenberg, Laura J ORCID logo; Cheung, Khan; Man, Lauren; Carini, Alessia; Russell, Bayden D ORCID logo
Publisher PANGAEA
Contributor Yang, Yan
Publication Year 2023
Rights Creative Commons Attribution 4.0 International; https://creativecommons.org/licenses/by/4.0/
OpenAccess true
Representation
Resource Type Dataset
Format text/tab-separated-values
Size 7231 data points
Discipline Immunology; Life Sciences; Medicine; Microbiology, Virology and Immunology