Raw sequence reads are a collective of target capture reads for homalopsid snakes. Both fresh and degraded samples are part of this dataset. Raw sequence reads

This project takes a phylogenomic approach to resolving the Homalopsidae phylogeny using targeted capture loci (ultraconserved elements, anchored hybrid enrichment loci, and standard nuclear protein coding genes using in Squamate studies) from the SqCL v2 probe set of Singhal et al. (2017). This project include 157 homalopsid samples across multiple genera and species, 41 samples of which are from museum samples (degraded DNA).

Identifier
Source https://data.blue-cloud.org/search-details?step=~012951658A1015A781ACAC97A30333000CE760BBB72
Metadata Access https://data.blue-cloud.org/api/collections/951658A1015A781ACAC97A30333000CE760BBB72
Provenance
Instrument Illumina NovaSeq 6000; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Contributor Rutgers University-Newark
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Temporal Point 2023-02-27T00:00:00Z