Extracellular enzymatic activity from the Arctic Ocean during POLARSTERN cruise ARK-XXVII/3 (IceArc) from August-September 2012

DOI

Sampling was conducted with a TV-guided multiple corer (MUC), in order to retrieve undisturbed sediment cores. Upon retrieval of the MUC, the overlying water was carefully removed from each core and the core was cut into the following sediment horizons using a steel plate and a custom-made plastic ring: 0-1 cm, 1-5 cm, 5-10 cm. At each station, sediment samples from three replicate cores were pooled and transferred to a cooling container (0°C), where subsamples for extracellular enzymatic activity analyses were taken. The potential extracellular enzymatic activities of the hydrolases beta-glucosidase, chitobiase, aminopeptidase and extracellular enzymes acting as esterases were determined in alignment with Boetius and Lochte, 1994 (https://doi.org/10.3354/MEPS104299) and Boetius & Damm 1998 (https://doi.org/10.1016/S0967-0637(97)00052-6). The method uses small substrate proxies linked to a fluorophore. When the fluorophore is cleaved from the substrate, enzymatic hydrolysis is measured as an increase in fluorescence with time. Determinations of extracellular enzymatic activities were performed in triplicate for all samples with a Hitachi F-2000 spectrofluorometer.

The substrates and final concentrations used in the assays were the following:100 µM 4-Methylumbelliferyl ß-D-glucopyranoside to measure the activity of beta-glucosidases.100 µM 4-Methylumbelliferyl N-acetyl-ß-D-glucosaminide to measure the activity of chitobiases .500 µM L-Leucine-7-amino-4- methylcoumarin hydrochloride to measure the activity of aminopeptidases.100 µM Fluorescein diacetate to measure the activity of esterases.

Identifier
DOI https://doi.org/10.1594/PANGAEA.892284
Related Identifier References https://doi.org/10.3389/fmars.2022.1004959
Metadata Access https://ws.pangaea.de/oai/provider?verb=GetRecord&metadataPrefix=datacite4&identifier=oai:pangaea.de:doi:10.1594/PANGAEA.892284
Provenance
Creator Bienhold, Christina ORCID logo; Boetius, Antje ORCID logo
Publisher PANGAEA
Contributor Alfred Wegener Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven
Publication Year 2018
Funding Reference Seventh Framework Programme https://doi.org/10.13039/100011102 Crossref Funder ID 294757 https://cordis.europa.eu/project/id/294757 Assessment of bacterial life and matter cycling in deep-sea surface sediments
Rights Creative Commons Attribution 3.0 Unported; https://creativecommons.org/licenses/by/3.0/
OpenAccess true
Representation
Resource Type Dataset
Format text/tab-separated-values
Size 147 data points
Discipline Earth System Research
Spatial Coverage (114.916W, 77.169S, 136.968E, 79.650N); Arctic Ocean; Laptev Sea
Temporal Coverage Begin 2012-08-28T21:22:00Z
Temporal Coverage End 2012-09-02T20:39:00Z