PacBio HiFi read metagenomes from water samples collected in the western Fram Strait using Remote Access Samplers

This project consists of the metagenome component of the larger FRAM RAS project. RAS stands for Remote Access Samplers, the autonomous sampling devices placed on moorings at specific locations in the Fram Strait region to collect samples year-round. In this project, water samples were collected during the 2016-2017 annual cycle and subsequently used for long-read, HiFi metagenome sequencing. At each sampling time point, ~1L of seawater was autonomously pumped into sterile plastic bags and fixed with mercuric chloride. After RAS recovery, water was filtered onto 0.22 µm Sterivex cartridges and samples frozen at -20°C until DNA extraction. Samples were sequenced at the Max Planck Genome Center, Cologne, using a PacBio Sequel II platform.

Identifier
Source https://data.blue-cloud.org/search-details?step=~012554EF49C342FC371E86A66C5722403CCEF75D309
Metadata Access https://data.blue-cloud.org/api/collections/554EF49C342FC371E86A66C5722403CCEF75D309
Provenance
Instrument Sequel II; PACBIO_SMRT
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Spatial Coverage (-2.790W, 78.830S, -2.790E, 78.830N)
Temporal Coverage Begin 2016-08-11T00:00:00Z
Temporal Coverage End 2017-07-10T00:00:00Z