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Bulk Segregant Analysis of copepod metamorphosis rate
This study aimed to identify genomic loci associated with metamorphosis rate in the copepod Tigriopus californicus. F1 hybrids were generated between two divergent populations:... -
Tigriopus californicus Raw sequence reads population hybrids
Sequences from a study of genomic regions contributing to reproductive isolation in crosses of populations of this copepod species -
Differential gene expression and mitonuclear incompatibilities in fast- and s...
Mitochondrial functions are intimately reliant on proteins and RNAs encoded in both the nuclear and mitochondrial genomes, leading to inter-genomic coevolution within taxa.... -
Tigriopus californicus Transcriptome or Gene expression
This study aimed at measuring transcriptome-wide gene expression in four populations of the copepod T. californicus. Populations were exposed to two different thermal regime, a... -
Effects of oxidative stress on sex-specific gene expression
Oxidative stress reflects the imbalance of pro-oxidants and antioxidants. Prolonged oxidative stress can induce cellular damage, diseases and aging, and the effects may be... -
Differential expression between SD, SCN, and their hybrids
This study compared gene expression levels between low-fitness hybrids and their parental populations (SD: San Diego, and SCN: Santa Cruz). -
Phenotypic and transcriptomic responses to salinity stress across genetically...
Species inhabiting the North American west coast intertidal must tolerate an extremely variable environment, with large fluctuations in both temperature and salinity. Uncovering... -
T. californicus transcriptome 454 pyrosequencing
This study aimed at characterizing the protein-coding regions of the copepod Tigriopus californicus. Samples from two divergent populations (San Diego and Santa Cruz) were... -
Hybrid dysfunction and physiological compensation in gene expression
The formation of new species is often a consequence of genetic incompatibilities accumulated between populations during allopatric divergence. When divergent taxa interbreed,... -
MicroRNA and mRNA coexpression in copepods
This projects examines two levels of gene regulation, including mRNA and microRNAs, in a marine copepod that is an excellent model for studies of adaptation to environmental... -
Copepod hypoxia response and gene expression
The goal of this study was to quantify transcriptional response of the abundant tidepool copepod to low-oxygen stress in water, which is a common environmental issue for... -
Alternative splicing of circadian genes in intertidal copepods
This study aimed at characterizing splice variants associated with circadian rhythms in intertidal copepods.</p><p>The experiment used copepods from San Diego,... -
Consequences of HSF knockdown on gene expression during the heat shock respon...
Although the existence of a cellular heat shock response is nearly</p><p>universal, its relationship to organismal thermal tolerance is... -
Genetic incompatibilities in reciprocal hybrids between populations of Tigrio...
All mitochondrial-encoded proteins and RNAs function through interactions with nuclear-encoded proteins, which are critical for mitochondrial performance and eukaryotic fitness.... -
Transcriptomic response of Tigriopus californicus populations to a fluctuatio...
Populations that tolerate extreme environmental conditions with frequent fluctuations can give valuable insights into physiological limits and adaptation. In some estuarine and... -
Intraspecific variation in phenotypic and transcriptomic plasticity in Tigrio...
Species inhabiting the North American west coast intertidal must tolerate an extremely variable environment, with large fluctuations in both temperature and salinity. Uncovering... -
Tigriopus californicus Raw sequence reads
T. californicus is an intertidal copepod crustacean. It is a model for the study of phenotypic plasticity and thermotolerance. -
Sex differences in transcriptional response to heat stress in Tigriopus calif...
This study aimed to quantify differences in gene expression between male and female copepods during acute heat stress.</p><p>Several egg sacs were hatched together... -
Recovery from hybrid breakdown reveals a complex genetic architecture of mito...
Reproductive isolation is often achieved when genes that are neutral or beneficial in their genomic background become functionally incompatible in a foreign genome, causing... -
Sequencing and assembly of transcriptomes of copepods from Oregon
This project aimed to assemble and describe the protein-coding genes from the genomes of populations of Tigriopus californicus from Oregon, USA.