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Clinical isolate sequencing
Sequencing of several clinical isolates of different species -
Recovery of nearly 8,000 uncultivated bacterial and archaeal genomes substant...
Challenges in cultivating microorganisms have limited the phylogenetic diversity of currently available microbial genomes. This is being addressed by advances in sequencing... -
Recovery of high-quality assembled genomes via single-cell genome-guided binn...
High-quality (HQ) reference genomes are essential for understanding the phylogeny and function of uncultured microbes in complex microbial ecosystems. However, existing... -
Bacterial WGS validation panel
The set represents a typical workflow in the public health microbiological laboratory: 10 Enterobacteriaceae isolates, 5 gram-positive cocci, 5 gram-negative non-fermenting... -
A microfluidics-free centrifugally-driven nano-liquid pipetting system (CNPS)...
We developed a microfluidics-free centrifugally-driven nano-liquid pipetting system (CNPS) for single-cell whole genome amplification and tested it in several microorganisms. -
Metagenomes containing bacteria from positive blood culture broths in patient...
Metagenomes containing bacteria from positive blood culture broths in patients with sepsis -
Uncovering new skin microbiome diversity through culturing and metagenomics
Metagenomes, cultured reference genomes and metagenome assembled genomes Pure cultures -
Diversity_of_MRSA
http://www.sanger.ac.uk/resources/downloads/bacteria/staphylococcus-aureus.html This data is part of a pre-publication release. For information on the proper use of... -
Two weeks in the World 2020
The Two Weeks in the World research project has resulted in a dataset of 3100 clinically relevant bacterial genomes with pertaining metadata, collected from 59 diagnostic units... -
Staph aureus and gram negative isolates from blood culture Raw sequence reads
Isolation of pathogens directly from primary liquid blood culture infection diagnosis using WGS -
The16S rDNAsequencing data of tumor tissues from MMTV-PyMT mice
The16S rDNAsequencing data of tumor tissues from MMTV-PyMT mice -
Genome sequencing of zebrafish, Danio rerio, skin mucus microbiota
Aerobic cultured isolates from the zebrafish, Danio rerio, skin mucus microbiota were purified and their genomes were sequenced to form hypotheses on functional roles. The... -
Insights on catheter-related bloodstream infections: a prospective observatio...
Central venous catheter-related bloodstream infection (CRBSI) is a huge public health concern with considerable impact on mortality and health costs. A three years observational... -
Marquette University BIOL4802 Experimental Microbiology
Single isolates from an undergraduate microbiology laboratory class at Marquette University (BIOL4802). In this class, students think of a question about a particular... -
CDC HAI-Seq Gram-negative bacteria
CDC Division of Healthcare Quality Promotion’s BioProject for whole genome sequence data of Gram-negative bacteria -
Bacteria Genome sequencing and assembly
Bacteria with antagonistic activity against Staphylococcus aureus -
Bacterial isolates from intensive care units
Whole genome sequencing of bacterial isolates over a 1-year period from a hospital's intensive care units. -
BactID
Bacterial identification run in house at UCLA -
RNA Atlas of Bacterial Human Pathogens Uncovers Stress Dynamics Linked to Bac...
Pathogenic bacteria encounter a variety of stressful host environments during infection. Their responses to meet these challenges protect them from deadly damages and aid in...