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Evaluating Nanopore-based bacterial variant calling
Benchmark various nanopore-based variant callers on 14 different species. Samples are sequenced on the latest (September 2023) R10.4.1 Nanopore flowcells and Illumina. Ground... -
ATCC genome sequencing
This project involved sequencing some bacterial isolates from ATCC (https://www.atcc.org) to test ONT-only analysis methods.