37 datasets found

Challenges in cultivating microorganisms have limited the phylogenetic diversity of currently available microbial genomes. This is being addressed by advances in sequencing...

Veterinary Pathogens sequenced as part of the effort to Combat Antibiotic Resistant Bacteria

The purpose of this project is related to metagenomic survey and genomic epidemiology analysis of antimicrobial resistance bacteria (in particular, carbapenem and/or beta-lactam...

The Two Weeks in the World research project has resulted in a dataset of 3100 clinically relevant bacterial genomes with pertaining metadata, collected from 59 diagnostic units...

Aerobic cultured isolates from the zebrafish, Danio rerio, skin mucus microbiota were purified and their genomes were sequenced to form hypotheses on functional roles. The...

Veterinary Pathogens sequenced as part of the effort to Combat Antibiotic Resistant Bacteria

CDC Division of Healthcare Quality Promotion’s BioProject for whole genome sequence data of Gram-negative bacteria

Vibrio spp. genomes sequenced for PulseNet surveillance in the USA

Aeromonas is found in many different environments, can be a pathogen in some animals and a symbiont in others. We sequenced and analyzed genomes to identify new toxins...

Sequencing of Aeromonas veronii bv sobria strain NS13

The object of this study is to explore the association between maternal gut microbiota and risk of congenital heart disease in offspring, as well as the possible mechanisms...

Veterinary Pathogens sequenced as part of the effort to Combat Antibiotic Resistant Bacteria

Nine different bacterial strains belonging to three genera, Aeromonas, Flavobacterium and Pseudocardia were sequenced using the MinION and MiSeq. Different assembly pipelines...

Veterinary Pathogens sequenced as part of the effort to Combat Antibiotic Resistant Bacteria

This study examined the genomes of A. hydrophila and A. dhakensis isolated in catfish farms and human patients in the Mekong Delta. Comparing with ANI results, it was found that...

<b>FDA-ARGOS project update</b> <p>FDA-ARGOS database updates may help researchers rapidly validate diagnostic tests and use qualified genetic sequences to...

Nucleotide sequences including G+C contents and oligonucleotide compositions tend to be more similar between plasmid and hosts' chromosome than between the plasmid and non-host...

Genome sequencing of Aeromonas species from both clinical and environmental samples

Single colony and metagenomic samples for the ReNEW publication Raw sequence reads

Whole genome sequencing of bacteria in clinical samples, mainly from the A Coruna University Hospital Complex (CHUAC, Galicia, Spain) and associated collections, under project...