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Recovery of nearly 8,000 uncultivated bacterial and archaeal genomes substant...
Challenges in cultivating microorganisms have limited the phylogenetic diversity of currently available microbial genomes. This is being addressed by advances in sequencing... -
Motility competition-based bacterial community from microplastic biofilms
We have invented a method for isolating mobile bacteria from microplastic biofilms, which is based on bacterial motility competition in colonizing microplastic. These sequences... -
Environmental Surveillance of ESBL and Carbapenemase-Producing Gram-Negative ...
We investigated the presence and prevalence of ESBL- and Carbapenemase-carrying bacterial species by swabbing "high touch" areas as deduced from literature (taps, door handles,... -
Two weeks in the World 2020
The Two Weeks in the World research project has resulted in a dataset of 3100 clinically relevant bacterial genomes with pertaining metadata, collected from 59 diagnostic units... -
microbial electrolysis cell sequencing
Microbial communities in the suspended sludge and electrodes biofilms were investigated in the microbial electrolysis cell. -
CDC HAI-Seq Gram-negative bacteria
CDC Division of Healthcare Quality Promotion’s BioProject for whole genome sequence data of Gram-negative bacteria -
Pakistan and United States ICU sink/water transmission dynamics
Use selective bacterial culture to understand the identity, prevalence, persistence, and transmission of MDROs contaminating hospital intensive care unit sinks and water sources... -
Collection of 3,087 bacterial metagenome-assembled genomes recovered from met...
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set... -
soil bacterial isolates
The different 122 bacteria isolated from soil aggregates under three fertilizer treatments -
The Genome sequencing and assembly of Acinetobacter spp.
The Genome sequencing and assembly of Acinetobacter spp. -
Pakistan and United States ICU transmission dynamics
Use selective bacterial culture to understand the identity, prevalence, persistence, and transmission of bacteria contaminating hospital intensive care unit surfaces in two... -
16S rDNA amplicon sequencing of Dermacentor nuttalli ticks
Amplification of V4-V5 hypervariable regions was performed as conventional PCR procedure. The primers 515F (5'- GTG CCA GCM GCC GCG GTA A -3') and 907R (5'- CCG TCA ATT CCT TTG... -
FDA-ARGOS is a database with public quality-controlled reference genomes for ...
<b>FDA-ARGOS project update</b> <p>FDA-ARGOS database updates may help researchers rapidly validate diagnostic tests and use qualified genetic sequences to... -
CDC Granular Modeling Pathogen WGS Data
Whole genome sequencing data from non-Clostridioides difficile isolates recovered as part of the CDC-funded Granular Modeling project. -
Marquette University BIOL4802 Experimental Microbiology
Single isolates from an undergraduate microbiology laboratory class at Marquette University (BIOL4802). In this class, students think of a question about a particular... -
Antibiotic Resistant Isolates from CSUSB Microbiology Course
Sequence data from the hybrid assembly of four genomes from antibiotic resistant bacteria isolated by undergraduates in a microbiology course -
Enhanced detection system for hospital associated transmission (EDS-HAT)
Whole genome sequencing of bacterial pathogens is combined with machine learning and data mining of the electronic medical record to enhance outbreak detection in hospitals and...
