269 datasets found

Metagenomic sequencing, assembly and analysis to discover biosynthetic gene clusters responsible for producing bacterial secondary metabolites from sponge symbiont bacteria. For...

Sequencing by Illumina of sponge microbiome associated with Antarctic marine sponges using a metagenomic approach.

Prokaryotic communities compose a fundamental portion of the marine sponge holobiont. Inspite of their putative relevance in host functioning, in-depth knowledge of the...

Early freshwater and sponges samples from lake Baikal.

In the present study, microbial communities of sponges, Sediments and Seawater inhabiting coral reef ecosystems were investigated using barcoded pyrosequencing of 16S rRNA gene...

Metagenomics of 5 sponges isolated near Japan sea

Assessment of the microbial community associated with marine sponges from two locations at several depths.

The genes and transcripts of 16S rRNA were amplified from seawater, S. carteri, and X. testudinaria DNA (originating the following datasets: WTD1-WTD3, ASD1-ASD3, and AXD1-AXD3...

Comparison of the microbial community in the abnormal and healthy sponge tissues from the Red Sea.

This study investigated the effects of the facultative symbiosis between P. ficiformis and the cyanobacteria Candidatus Synechococcus feldmannii on the microbiome

Reveal the difference of different development

Guam Dysideidae Sponge Holobiont Sequencing project

The project was aimed at metatranscriptome analysis of sponge, Amphimedon sp, to understand the functional role symbiotic microorganisms.

Marine invertebrates and their microbiomes have been a rich source of bioactive compounds and interesting genomic features. However, factors such as which species and tissue are...

microbiome in Terpios hoshinota

In the framework of the SpongePOP project, sediment and water samples were collected during two sampling campaigns, namely SpongePop 1.0 (SP1 17 May-1 June 2014) and SpongePop...

The giant barrel sponge, Xestospongia muta, is a high microbial abundance sponge on Caribbean coral reefs, living along shallow to mesophotic depth gradients where multiple...

Complex host species-specific assemblage with remarkable shifts in microbiome structure throughout the life history of the excavating sponge Thoosa mismalolli

Metagenome sequencing of sponges in mesophotic coral reef ecosystems without biological replicates. The exact sampling location is 13 32 8.83 N, 120 59 30.77 E .

Marine sponges have recently been recognised as natural samplers of environmental DNA (eDNA) due to their effective water filtration and their ubiquitous, sessile and...