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skin microbiome of sea cucumber after induced stress from transportation
This project study the acclimation dynamics of the sea cucumber skin microbiome after induced stress from handling and transportation. Sea cucumber species Holothuria scabra... -
Hydroponic/ Aquaponic microbiome
Hydroponic Cropping Systems (HCS) including hydroponics and aquaponics are becoming increasingly popular as a solution to address global food security. Plants are grown... -
Evaluating the effects of translocation and host characteristics on skin asso...
The factors shaping the composition and dynamics of microbiomes associated to aquatic organisms, especially regarding skin microbiomes have been understudied despite the... -
Temporal dynamics of Atlantic salmon skin and gill mucosal microbiomes in FW ...
As the global population continues to increase, so to does the need for a sufficient and sustainable source of protein for human consumption. In line with this need, aquaculture... -
Leopard Coral Grouper
metagenome data for gut microbiota, seawater samples (costal seawater, inlet seawater, rearing tank seawater, outlet seawater) -
Comparison of ulcerated and healthy skin bacterial microbiome in crocodile li...
Due to changes in the environment, the population of crocodile lizard is decreasing rapidly.In order to better protect the crocodile lizard, we studied the skin... -
Evaluation of microbial source tracking of human sources in spiked water and ...
Sequencing reads for V3-V4 and V4 regions of the 16S rRNA amplicon for fecal samples and spiked water and soil samples. Samples were sequenced for a microbial source tracking... -
Bacterial communities from Sierra Nevada amphibians and environmental samples...
Analysis of bacterial communities from the skin of Sierra Nevada yellow-legged frogs (R. sierrae) and surrounding environment, with the goal of understanding interactions with... -
Large scale variability in the Spring Peeper (Pseudacris crucifer) skin micro...
We characterized variation in the skin bacterial communities of spring peepers (Pseudacris crucifer) and water and substrate of their breeding habitat from nine ponds sampled... -
Norfolk Island shark virome Metagenome
Viromes were collected from the skin surfaces of three shark species (tiger, dusky, and galapogos sharks) around Norfolk Island. The project will investigate skin surface virome... -
Evaluating the variation in fish skin microbiomes among hierarchical levels
The skin microbiome of fish is part of the protecting barrier between the host and its environment, and it can impact host fitness. Microbiome community members of fish skin may... -
Insights into the microbiota of Asian seabass (Lates calcarifer) with tenacib...
Outbreaks of diseases in farmed fish remain a recurring problem, despite the development of vaccines and improved hygiene standards on aquaculture farms. One commonly observed... -
Metatranscriptome of diverse samples
method construction -
Comparison of next-generation sequencing methods for catfish bacterial microb...
Compared 3 different 16S rRNA sequencing protocols (two nanopore sequencing protocols targeting full length 16S rRNA gene and Illumina MiSeq on V4 region) for bacterial...