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Cultivation and metabarcoding of bacteria associated with Ectocarpus subulatu...
This project aims to elucidate the culturable and unculturable bacterial microbiome of Ectocarpus subulatus (Phaeophyceae) cultures. Bacteria were isolated by direct plating and... -
IberianPonds 2017 18SV9
The IberianPonds is a multi-region experimental facility using 192 freshwater mesocosms distributed across six locations (sites in Arid, Mediterranean, Temperate and Alpine... -
Mitochondrial DNA sequencing of Oryzias setnai
Shotgun sequencing data of long PCR products amplified from mitochondrial DNA of Oryzias setnai for molecular phylogenetic analysis of the genus Oryzias. -
Metagenomic analysis of gut microbiome of interleukin 17 receptor A deficient...
the aim of study is to elucidating the importance of IL-17RA for controlling gut microbiome. After establishing IL-17RA-KO medaka (Oryzias latipes) strain, gut microbiome... -
Microbial communities and nutrient dynamics in experimental microcosms are al...
Bacillus thuringiensis subsp. israelensis (Bti) is the most widely used biopesticide against mosquitoes and blackflies, with a history of high specificity and efficacy. However,... -
Song Colorado freshwater fish
Microbiota of slime and gut samples from different species of freshwater fish from the Colorado River. -
High habitat-specificity in fungal communities of an oligo-mesotrophic, tempe...
Freshwater fungi are a poorly studied paraphyletic group that include a high diversity of phyla. Most studies of aquatic fungal diversity have focussed on single habitats, thus... -
Transformation of the microbial plankton community in the Usinsky bay of the ...
Usinsky Bay is a freshwater estuary about 50 km long, formed as a result of flooding of the lower section of the Usa River valley after the construction of the Kuibyshev... -
IberianPonds 2016 18SV9
The IberianPonds is a multi-region experimental facility using 192 freshwater mesocosms distributed across six locations (sites in Arid, Mediterranean, Temperate and Alpine... -
Microbial diversity in arctic freshwaters is structured by inoculation of mic...
A 12-year sample archive of DNA from Alaskan arctic tundra ecosystems are available to the Earth Microbiome Project for comparison of microbial diversity across a range of... -
Tijuana River pollution at Imperial Beach 2019
Rain events increase Tijuana river flow to levels that the international water treatment plant in the Mexico-US border can not process. Therefore, rain runoff and sewage... -
Developing techniques of DNA/RNA analyses for studying ecological communities...
Monitoring natural ecological communities is often time-, labour-, and money-consuming work. DNAs that are derived from organisms and remain in natural environments... -
Insights into the microbiota of Asian seabass (Lates calcarifer) with tenacib...
Outbreaks of diseases in farmed fish remain a recurring problem, despite the development of vaccines and improved hygiene standards on aquaculture farms. One commonly observed... -
fish gut metagenome Raw sequence reads
The goal of this study was to test the role of adaptive immunity as an ecological filter on the zebrafish intestinal microbiota. We surveyed the intestinal microbiota of both... -
IberianPonds 2017 COI
The IberianPonds is a multi-region experimental facility using 192 freshwater mesocosms distributed across six locations (sites in Arid, Mediterranean, Temperate and Alpine... -
Detailed characterization of the microbiomes of lake balls (marimo)
This project will characterize the phylogenetic diversity of eukaryotic and prokaryotic microorganisms of lake balls (marimo) based on metabarcoding and metagenomic data. -
The gut microbiota: a new perspective on the toxicity of malachite green (MG)
Gut microbiome critically contributes to host health status. Thus investigating the relationship between gut microbiome and toxic chemicals is a hot topic in toxicology... -
Fish skin and gut microbiota along an urbanization gradient
Fish skin and gut microbiota were monitored concurrently to determine whether these two ecological niches are equally affected by urbanization and to define the extent to which... -
Hydrocarbon Metagenomics Project
Metagenomics for Greener Production and Extraction of Hydrocarbon Energy: Creating Opportunities for Enhanced Recovery with Reduced Environmental Impact -
Zebrafish intestinal microbiota 16S rRNA gene sequencing - impact of life-lon...
The goal of this study was to characterize how life-long diets different in dietary fat levels impact zebrafish gut microbioa assembly. A cohort of embryos born from one sibship...