49 datasets found

Genotyping guppy MHC alleles and supertypes to look at effect of domestication on MHC diversity and parasite resistance

Phenotypic plasticity is the nearly ubiquitous ability of a genotype to produce different phenotypes in response to different environments, but how such non-heritable variation...

Genomic variation was examined using GBS sequencing in populations of guppies (Poecilia reticulata) throughout their invaded range in Hawaii, as well as several native...

PCR-free high coverage whole-genome sequencing of the guppy (Poecilia reticulata) 12 samples (1 male and 1 female) from 6 populations ranging from the 3 divergent drainages of...

This sequencing is part of an integrated programme of molecular genetic studies of sex chromosome evolution, and specifically, to use the guppy (Poecilia reticulata) to test the...

Poecilia reticulata selection experiment upon brain size.

This study contains three different sample types: 1. Pool-Seq of four iso-Y lines (n=48 per Iso-Y line) 2. Whole genome resequencing of natural wild-caught individuals (n=10) 3....

Single-cell RNA-sequencing reads from skin, heart, liver, and gonad tissues from replicate adult male and female guppies.

In some very recent work we examined for evidence of adaptation in P. reticulata living in rivers in Southern Trinidad heavily polluted with typical petrogenic hydrocarbons...

RADseq population genetics study of 9 populations of guppies

Using RNA-seq and DNA-seq data from both wild and laboratory populations, we characterise sex chromosome divergence in Poecilia reticulata and explore the relationship between...

Here, we provide a new guppy reference genome assembly that uses a male sample, HiC based chromosome contact information, and long-read PacBio sequencing. We show that our new...

In this study we investigated changes in mRNA levels in the female reproductive tract 1 and 6 hours after contact with the ejaculate to i) characterize and define which genes...

Here, we present FishPIE, a nested PCR primer set of 82 phylogenetic informative exon markers for ray-finned fish phylogenetic analysis. By testing 203 species from 31 orders of...

RNAseq reads from whole brain sequencing of Trinidadian guppies (Poecilia reticulata) from two river drainages (Aripo &amp Quare), two populations (high-predation &amp...

Transcriptomes of optic tectum, telencephalon and midbrain of female guppys selected for their schooling behavior and from control lines

WGS to investigate rapid genomic adaptation in experimental populations of the guppy (Poecilia reticulata).

The Trinidadian guppy, Poecilia reticulata, represents one of the best vertebrate models for the study of how phenotypic variation within a population is linked to adaptation to...

This study sampled multiple populations, across Trinidad, that are adapted to different predation environments. The goal of the study is to identify regions of the genome that...

Trimmed paired-end DNAseq of adult female (3) and adult male (3) muscle tissue from a single large, outbred laboratory population established in Niclas Kolm's lab. Samples were...