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Recovery of nearly 8,000 uncultivated bacterial and archaeal genomes substant...
Challenges in cultivating microorganisms have limited the phylogenetic diversity of currently available microbial genomes. This is being addressed by advances in sequencing... -
Spore to VO - HS
Spore to Viable Organisms - Heat Shock -
The complete genomes of actinobacterial strains from the NBC collection from ...
This project describe the sequencing and assembly of genomes of actinobacterial strains from the NBC collection at the Novo Nordisk Foundation Center for Biosustainability at he... -
Natural Products Discovery Center at UF Scripps
The Natural Products Discovery Center (NPDC) at UF Scripps hosts one of the world's largest collections of Actinobacteria. This collection, a legacy of some of the largest... -
ISS Rodent Microbiome and Associated Samples
The microbiome of rodents and associated samples on the international space station Strains obtained from pure cultures. Not metagenomic assemblies -
Two weeks in the World 2020
The Two Weeks in the World research project has resulted in a dataset of 3100 clinically relevant bacterial genomes with pertaining metadata, collected from 59 diagnostic units... -
Genome sequencing of zebrafish, Danio rerio, skin mucus microbiota
Aerobic cultured isolates from the zebrafish, Danio rerio, skin mucus microbiota were purified and their genomes were sequenced to form hypotheses on functional roles. The... -
Bacterial isolates from intensive care units
Whole genome sequencing of bacterial isolates over a 1-year period from a hospital's intensive care units. -
Genomic_and_bacterial_blueprint_of_the_human_gastrointestinal_microbiota
Here we present a comprehensive collection of 737 whole-genome sequenced bacterial isolates from humans to understand the blueprint of human gastrointestinal microbiota. This... -
Collection of 3,087 bacterial metagenome-assembled genomes recovered from met...
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set... -
Bacterial isolates from patients attending regional referral hospitals in Tan...
Miscellaneous bacterial isolates collected at six regional referral hospitals in Tanzania in 2020-2021. The "ESKAPE pathogen" isolates from this project were published in... -
Development of a Probiotic to mitigate Coral Bleaching
Corals are colonized by symbiotic microorganisms that exert a profound influence on the animal’s health. One noted symbiont is a single-celled alga which provides the coral with... -
Genomic Catalog of Human Bladder Bacteria
We have developed a bladder-specific bacterial reference database consisting of 1134 genomes to aid in genomic, functional, and experimental analyses of the human bladder... -
16S rDNA sequencing
The object of this study is to explore the association between maternal gut microbiota and risk of congenital heart disease in offspring, as well as the possible mechanisms... -
Human microbiome associated bacterial genomes
This project is designed to uncover antimicrobial drug leads from human symbionts. -
Sponge-associated bacteria
Culturable bacterial community associated with marine sponge Aplysina -
Clinical evaluation of mNGS in unbiased pathogens diagnosis of UTIs
Advance the implementation of mNGS in pathogen diagnosis in clinics. -
Bacteria and yeast pathogens sequenced from human blood culture specimens
Bloodstream infection is a major cause of morbidity and mortality worldwide. Early pathogen detection and administration of appropriate antimicrobial therapy substantially...