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Spore to VO - HS
Spore to Viable Organisms - Heat Shock -
As part of this study, we performed an evolution experiment where we selected...
We grew eight Bacilli strains and species, four replicates each, on a chemically defined agar growth medium by inoculating cells in the center of the growth plate. These cells... -
Drakenstein12internal
This is a large scale project with the sequencing co-funded by collaborators at the University of Cape Town and WT Core (I2818). This is a project aimed at deepening our... -
Strains of the Bacillales order isolated from various sources, including soil...
Dataset for describing and studying the genetic potential of a diverse set of Bacillales strains. -
Complete genome sequence of 14 Bacillus subtilis soil isolates to study secon...
Bacillus subtilis is a plant benefiting soil-dwelling Gram-positive bacterium with secondary metabolite production potential. Here, we report the complete genomes of 14 B.... -
Whole genome sequencing of biocontrol bacteria
The goal of the project is to uncover genome sequences of bacteria that show biocontrol activity of plant pathogens. Bacteria were isolated from several plant species including... -
Crop Bioprotection Bacillus genome sequencing
Genome sequencing of Bacillus isolates -
Complete genome sequences of 52 Bacillus and Priestia strains isolated from W...
Genomes of 78 Bacillus and Priestia strains, isolated from West-African fermented foods and bought from DSMZ, were whole-genome-sequenced using Oxford Nanopore Technologies. -
Genomic_and_bacterial_blueprint_of_the_human_gastrointestinal_microbiota
Here we present a comprehensive collection of 737 whole-genome sequenced bacterial isolates from humans to understand the blueprint of human gastrointestinal microbiota. This... -
Tracking_the_dynamics_of_AMR_genes_within_enteric_bacterial_communities_in_pi...
The aim of the proposed research is to define the nature and frequency of transfer of antimicrobial resistance (AMR) genes between pathogenic and commensal bacteria within their... -
Genomic Catalog of Human Bladder Bacteria
We have developed a bladder-specific bacterial reference database consisting of 1134 genomes to aid in genomic, functional, and experimental analyses of the human bladder... -
Microbial genes involved in the aromatic compound degradation deciphered thro...
Microbial genes involved in the aromatic compound degradation deciphered through metagenomics analysis of industrial wastewater -
Sponge-associated bacteria
Culturable bacterial community associated with marine sponge Aplysina -
Crop Bioprotection in collaboration with NRRL Raw sequence reads
Genome sequencing of Bacillus isolates. -
uncultured Bacillus sp. Transcriptome or Gene expression
Time-dependent RNA extraction from biofilms cells followed by their transcriptome analysis and comparing the gene expression pattern with that of broth culture. -
Agriculturally important microbes Genome sequencing
Genome sequencing of agriculturally important microbes -
Reliability of species detection in 16S microbiome analysis
The use of NGS-based testing of the bacterial microbiota is often impeded by inconsistent or non-reproducible results, especially when applying different analysis pipelines and... -
FDA medical products genome sequencing and assembly of multi-species isolates
Whole genome sequencing of pure cultured microbial isolates of multiple species as part of the Food and Drug Administration surveillance effort of pathogens in medical products. -
Molecular basis of thermal adaptation among bacteria from the polar and tropi...
This study aims to understand thermal adaptation of bacteria at molecular level. Whole genome sequencing and RNA-seq is carried out to understand and examined the mechanisms...