Genotyping of 4 European sea bass families with the DlabCHIP SNPs genotyping array

DOI

Four experimental backcross full-sib families (378, 454, 291 and 211 individuals) were produced by in vitro fertilization at Ifremer (Palavas-les-Flots, France). All 1334 individuals were genotyped with a ThermoFisher AxiomTM Sea Bass 57k SNP DlabChip at the genotyping platform Gentyane (INRAE, Clermont-Ferrand, France). SNP calling was done using ThermoFisher software AxiomAnalysisSuiteTM. Preliminary quality controls were applied with threshold values of 95% for SNP call rate and 90% for sample call rate.

Identifier
DOI https://doi.org/10.17882/75696
Metadata Access http://www.seanoe.org/oai/OAIHandler?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai:seanoe.org:75696
Provenance
Creator Allal, Francois; Griot, Ronan; Phocas, Florence; Brard-fudulea, Sophie; Morvezen, Romain; Bestin, Anastasia; Haffray, Pierrick; François, Yoannah; Morin, Thierry; Poncet, Charles; Vergnet, Alain; Cariou, Sophie; Brunier, Joseph; Bruant, Jean-sébastien; Peyrou, Bruno; Gagnaire, Pierre-alexandre; Vandeputte, Marc
Publisher SEANOE
Publication Year 2020
Rights CC0
OpenAccess true
Contact SEANOE
Representation
Resource Type Dataset
Discipline Marine Science