Transcriptomic responses to oil, a pathogen, or both in spleen tissues from juvenile red snapper (Lutjanus campechanus)

The objective of this study was to determine how transcriptomic responses in the spleen are altered in juvenile red snapper exposed to oil, a known fish pathogen (Vibrio anguillarum), or both. Overall design: Red snapper juveniles were exposed to oil, a pathogen (Vibrio anguillarum) or both. Oil exposure was for 8 days and pathogen exposure was for 1 hour, 24 hours before takedown. Oil solutions used in exposures were derived from high energy water accommodated fractions (HEWAF) prepared using Macondo well oil from the Deepwater Horizon oil spill following established procedures. At the end of the experiments, spleens were taken from organisms, RNA was extracted and sequenced.

Identifier
Source https://data.blue-cloud.org/search-details?step=~01256B430A7A35C84607BCB22FF03F85BF11C2D6150
Metadata Access https://data.blue-cloud.org/api/collections/56B430A7A35C84607BCB22FF03F85BF11C2D6150
Provenance
Instrument Illumina NovaSeq 6000; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Contributor Coastal Sciences, University of Southern Mississippi
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Temporal Point 2020-06-27T00:00:00Z