Semi-restored mangrove site soil microbiome metagenome 1

This study was initiated to find out the absolute abundance of presence of different bacterial community in this semi-restored mangrove site soil. It was done through isolation of soil DNA from the respective site and amplicon database generation through16S (V3-V4) rRNA Sequencing using Illumina MiSeq Platform. and then calculated diversity metrics for each sample and compared the types of communities, using the taxonomic assignments. We made a similar study for absolute abundance of presence of different bacterial community in this same mangrove site soil before restoration was initiated here and also from other degraded mangrove site soil before restoration and also from pristine undisturbed mangrove site soil. Comparison of all these information might result into identification of some particular bacterial community abundances which could be used as metrics of evaluation restoration of mangrove site soil in future studies.

Identifier
Source https://data.blue-cloud.org/search-details?step=~012674BFBBFB8ACFBCF3CC4F85A8841318E7B062B3F
Metadata Access https://data.blue-cloud.org/api/collections/674BFBBFB8ACFBCF3CC4F85A8841318E7B062B3F
Provenance
Instrument Illumina MiSeq; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Spatial Coverage (88.220W, 21.470S, 88.220E, 21.470N)
Temporal Coverage Begin 2021-01-17T00:00:00Z
Temporal Coverage End 2022-07-09T00:00:00Z