Transcriptomic responses to oil, a pathogen, or both in spleen and liver tissues from southern flounder (Paralichthys lethostigma)

The objective of this study was to determine how transcriptomic responses in the spleen and liver are altered in juvenile Paralichthys lethostigma exposed to oil, a known fish pathogen (Vibrio anguillarum), or both. Overall design: P. lethostigma juveniles were exposed to oil, a pathogen (Vibrio anguillarum) or both. Oil exposure was for 8 days and pathogen exposure was for 1 hour, 24 hours before takedown. Oil was from the Macondo well from the Deepwater Horizon oil spill and was mixed with sediment, following established procedures. At the end of the experiments, livers and spleen were taken from organisms, RNA was extracted and sequenced.

Identifier
Source https://data.blue-cloud.org/search-details?step=~0126BA18A64C5296BA2D712B5FDFACEC83128E6D493
Metadata Access https://data.blue-cloud.org/api/collections/6BA18A64C5296BA2D712B5FDFACEC83128E6D493
Provenance
Instrument Illumina NovaSeq 6000; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Contributor Coastal Sciences, University of Southern Mississippi
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Temporal Point 2020-05-08T00:00:00Z