Transcriptomic responses to oil, a pathogen, or both in spleen and liver tissues from juvenile Atlantic croaker (Micropogonias undulatus)

The objective of this study was to determine how transcriptomic responses in the spleen and liver are altered in juvenile Micropogonias undulatus exposed to oil, a known fish pathogen (Vibrio anguillarum), or both. Overall design: M. undulatus juveniles were exposed to oil, a pathogen (Vibrio anguillarum) or both. Oil exposure was for 8 days and pathogen exposure was for 1 hour, 24 hours before takedown. Oil solutions used in exposures were derived from high energy water accommodated fractions (HEWAF) prepared using Macondo well oil from the Deepwater Horizon oil spill following established procedures. At the end of the experiments, livers and spleen were taken from organisms, RNA was extracted and sequenced.

Identifier
Source https://data.blue-cloud.org/search-details?step=~01251D9F56377890348A91CE56CE52A944B8202B165
Metadata Access https://data.blue-cloud.org/api/collections/51D9F56377890348A91CE56CE52A944B8202B165
Provenance
Instrument Illumina NovaSeq 6000; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Contributor Coastal Sciences, University of Southern Mississippi
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Temporal Point 2019-08-28T00:00:00Z