Genomic analysis of Shewanella spp. isolated from fish

The aim of the present study was to classify and determine phylogenetic relationships of Shewanella spp. collected from fish. The complete genomes of 94 strains of Shewanella spp. from different fish species were sequenced using Illumina platform (MiSeq). Whole genome analysis showed that tested Shewanella spp. strains were clustered into 6 groups similar to reference strains of S. xiamenensis, S. oneidensis, S. glacialipiscicola, S. hafniensis, S. baltica, and S. oncorhynchi.

Identifier
Source https://data.blue-cloud.org/search-details?step=~012329D3AB44D4366D8C98F1C40F2908E58D8EC9B50
Metadata Access https://data.blue-cloud.org/api/collections/329D3AB44D4366D8C98F1C40F2908E58D8EC9B50
Provenance
Instrument Illumina MiSeq; NextSeq 550; ILLUMINA
Publisher Blue-Cloud Data Discovery & Access service; ELIXIR-ENA
Contributor The National Veterinary Research Institute
Publication Year 2024
OpenAccess true
Contact blue-cloud-support(at)maris.nl
Representation
Discipline Marine Science
Temporal Coverage Begin 2005-01-01T00:00:00Z
Temporal Coverage End 2021-01-01T00:00:00Z