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Bioindication diatomées : comparaison microscopie / barcoding ADN. Listes flo...
Description des 3 fichiers excels : DREAL 2016_2017 liste taxonomique microscopie_moleculaire.xlsx : Fichier excel donnant les listes floristiques diatomées des campagnes 2016... -
Bioinformatic scripts used to analyze fungal metabarcoding data obtained from...
Bioinformatic scripts used to sort, filter and analyze fungal raw sequence data obtained by metabarcoding foliar, bark and ground cover samples collected in an untreated... -
Different patterns in leaf-associated viromes and mycobiomes of wild plant po...
Supplementary methods and tables of Annexe 2: Different patterns in leaf-associated viromes and mycobiomes of wild plant populations between cultivated and natural ecosystems -
Annotation data about Multi Criteria Assessment Methods used in the agri-food...
This data article contains annotation data characterizing Multi Criteria Assessment Methods proposed in the scientific literature by INRA researchers. -
Code for the article "An epi-evolutionary model to predict spore-producing pa...
MATLAB codes for reproducing the simulations and main figures described in Fabre et al. 2022. An epi-evolutionary model for predicting the adaptation of spore-producing... -
Data from: Benefits and drawbacks of osmotic adjustment in Propionibacterium ...
Propionibacterium freudenreichii CIRM-BIA 129 and CIRM-BIA 1025 osmoadaptation in chemically defined medium (MMO) and osmoadaptation in the presence of glycine betaine (GB) were... -
OntoBiotope-BioNLP-OST
This version OntoBiotope-BioNLP-OST is a subset of the OntoBiotope ontology. created for the Bacteria Biotope task of BioNLP-OST 2019 competition. OntoBiotope is an ontology of... -
Bioinformatic scripts allowing the comparison of fungal metabarcoding pipelines
This dataset contains scripts and code that can be used to compare metabarcoding pipelines using a fungal mock community. These bioinformatics scripts were applied to the... -
FirmiData: Annotation of ICEs and IMEs in 40 Firmicutes genomes
Manually curated reference annotation of Integrative Conjugative Elements (ICEs) and Integrative and Mobilizable Elements (IMEs) and other degenerated ICEs and IMEs in 40... -
Supporting data for "Milk metabolome reveals variations on enteric methane em...
Supplementary information containing figures, tables and tabulated data for "Milk metabolome reveals variations on enteric methane emissions from dairy cows fed a specific... -
Chromosomal rearrangements but no change of genes and transposable elements r...
We present a new de-novo whole-genome assembly obtained from a high quality DNA extraction and long-reads sequencing Nanopore technology obtained from an isolate sampled in the... -
Thonon Culture Collection -TCC- a freshwater microalgae collection
The main objectives of the TCC are to maintain cultures and uncultured samples of freshwater microalgae and to ensure their availability for : - Research projects (research... -
Data supplementing the article “Exploring the capacity of aquatic biofilms to...
These data supplement the article “Exploring the capacity of aquatic biofilms to act as environmental DNA samplers: test on macroinvertebrate communities in rivers” Sinziana F.... -
Supplementary tables to manuscript: “Different patterns in leaf-associated vi...
Supplementary tables to manuscript in Chapter 3. -
2114 MAGs
TBD -
An easy and robust method for isolation and validation of single nucleotide p...
This dataset includes the sequence and SNP data, and the scripts for detecting SNP from targeted sequences isolated from the Erysipe alphitoides draft genome. The draft genome... -
Replication Data for "Large-scale multivariate dataset on the characterizatio...
Data provide detailed information on the diversity of bacterial communities present on 576 samples of raw pork or poultry sausages produced industrially in 2017. Bacterial... -
Grapevine-downy-mildew-genome.com: a web portal with genomic data and analysi...
http://grapevine-downy-mildew-genome.com/ is a web portal that provides public access to the reference genome of grapvine downy mildew (Plasmopara viticola, INRAE-PV221 strain).... -
BRC4Env, the Biological Resource Centre for the Environment
BRC4Env, the network of Biological Resource Centres for the Environment, aims at storing and providing environmental resources (biological material and associated data), in a... -
Diat.barcode, an open-access barcode library for diatoms
Diatoms (Bacillariophyta) are ubiquitous microalgae which produce a siliceous exoskeleton and which make a major contribution to the productivity of oceans and freshwaters. They...