Genetic and metabolic resources for Sipha maydis multi-symbiotic system

DOI

The Sipha maydis genome project generated a highly contiguous genome assembly of the cereal aphid Sipha maydis, revealing 24,453 protein-coding genes, including enzymes involved in an integrated metabolic network with two bacterial endosymbionts. This resource offers essential genetic and metabolic insights into the evolution and functioning of multi-symbiotic systems in insects.

This dataset contains genomic and functional annotation information of S. maydis genome and its di-symbiotic system, together with the inferred reactions and metabolic networks of the corresponding metabolic databases SipmaCyc (Sipha maydis), Bucap_SmCyc (Buchnera aphidicola str. Sm midelt) and Sersy_SmCyc (Serratia symbiotica str. Sm midelt). The metabolic databases are available in the ArtSymbioCyc collection.

Identifier
DOI https://doi.org/10.57745/6RYSBE
Metadata Access https://entrepot.recherche.data.gouv.fr/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.57745/6RYSBE
Provenance
Creator Renoz, Francois; Parisot, Nicolas; Baa-Puyoulet, Patrice; Gerlin, Leo; Fakhour, Samir; Charles, Hubert; Hance, Thierry; Calevro, Federica
Publisher Recherche Data Gouv
Contributor Parisot, Nicolas; Bâa-Puyoulet, Patrice; Renoz, Francois; UMR203 INRAE-INSA Lyon BF2I; UC Louvain; FNRS
Publication Year 2023
Funding Reference FNRS
Rights etalab 2.0; info:eu-repo/semantics/openAccess; https://spdx.org/licenses/etalab-2.0.html
OpenAccess true
Contact Parisot, Nicolas (INSA Lyon); Bâa-Puyoulet, Patrice (INRAE); Renoz, Francois (UC Louvain)
Representation
Resource Type Dataset
Format application/x-gzip; text/plain
Size 1037706; 2613; 2420020; 12476818; 5902; 139584787; 184858423; 19924
Version 6.0
Discipline Agriculture, Forestry, Horticulture; Computer Science; Geosciences; Life Sciences; Agricultural Sciences; Agriculture, Forestry, Horticulture, Aquaculture; Agriculture, Forestry, Horticulture, Aquaculture and Veterinary Medicine; Basic Biological and Medical Research; Biochemistry; Biology; Earth and Environmental Science; Environmental Research; Medicine; Natural Sciences