Caulifinder banks

DOI

This dataset gathers libraries used to run Caulifinder pipeline. Caulifinder is an automated tool for annotation of endogenous viral elements of the Caulimoviridae family. You can either choose each bank individually or pick all banks with an archive. Banks were built with data coming from : ICTV Teycheney et al. https://doi.org/10.1099/jgv.0.001497 ;

Diop et al. DOI:10.1038/s41598-017-16399-x ;

Geering et al. DOI: 10.1038/ncomms6269 ;

Llorens, C al. (2011) The Gypsy Database (GyDB) of Mobile Genetic Elements: Release 2.0 : https://gydb.org/index.php?title=Main_Page

Identifier
DOI https://doi.org/10.57745/ADFNMB
Metadata Access https://entrepot.recherche.data.gouv.fr/oai?verb=GetRecord&metadataPrefix=oai_datacite&identifier=doi:10.57745/ADFNMB
Provenance
Creator VASSILIEFF, Héléna; MAUMUS, Florian; HADDAD, Sana; JAMILLOUX, Véronique; TEYCHENEY, Pierre-Yves
Publisher Recherche Data Gouv
Contributor MAUMUS, Florian; INRAE
Publication Year 2022
Rights info:eu-repo/semantics/openAccess
OpenAccess true
Contact MAUMUS, Florian (INRAE)
Representation
Resource Type Dataset
Format application/x-fasta+txt; application/gzip
Size 514674; 317003; 5898; 173137; 23945
Version 1.1
Discipline Geosciences; Earth and Environmental Science; Environmental Research; Natural Sciences