-
Annotation of the genome assembly (version 2) of the microalga Tisochrysis lutea
We recently published the first draft genome of T. lutea obtained with the Illumina short-read technology. While this technology has a very low sequencing error rates, the... -
Source_files
The dataset provides transposable elements annotation (cf Transposable_elements_Annotation) of 11 hexaploid wheat (ArinaLrFor, Jagger, Julius, Lancer, Landmark, Mace, Norin61,... -
Minimal dataset for SQuIRE usage on Prunus Marouch
This dataset is composed of 3 files: (1) the sequence genome of Marouch (.fasta) (2) the annotation of Marouch genome (.gff3) (3) the rmsk informations from RepeatMasker... -
Brassicaceae transposable elements copies and Arabidopsis thaliana annotations
The Brassicaceae TE copies from Arabidopsis thaliana Col-0 ecotype, Arabidopsis lyrata, Capsella rubella, Arabis alpina, Brassica rapa and Schrenkiella parvula, used for Duster... -
Genomics data of a wild-type and a domesticated strains of the microalga Tiso...
Microalgal domestication is an expanding research field that aims to multiply and accelerate the potential of microalgae for various biotechnological purposes. We investigated... -
PiRATE: a Pipeline to Retrieve and Annotate Transposable Elements
To date, genome assembly of non-model organisms is usually not at chromosomal level and higly fragmented. This fragmentation is recognized to be, in part, the result of a bad...
