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The Doliolid microbiome (Dolioletta gegenbauri)
This study characterized the associated-microbiome of the doliolid Dolioletta gegenbauri. Specifically, the microbiome of full (fed) and empty (starved) gut specimens,... -
Vitamin B12 biosynthesis of Cetobacterium ceti isolated from the intestinal c...
Genus Cetobacterium is a common gastrointestinal bacterium in dolphins and includes two species: C. somerae and C. ceti. While the former produces vitamin B12, the production... -
We studied bacterioplankton community structure in a tropical estuary during ...
Using Illumina sequencing of the 16S rRNA gene, here we studied bacterial communities from the Nicoya’s gulf (Costa Rica), a large tropical estuary characterized by high... -
Microbiome profiling and antibiotic resistance genes prediction in submarine ...
Microbial community structure is influenced by natural processes and human activities. Although microorganisms play a role in pollutant degradation, there are some studies on... -
Marine chitin-associated metagenomes with vitamin supplementation
Metagenomes of microbial communities enriched on synthetic hydrogel chitin micro-particles from coastal seawater collected near Nahant, MA, USA, with and without vitamin... -
Eukaryotic algal community composition of tropical environments from solar sa...
analysis of 16S & 18S diversity of different environments on the island of Curacao, including salt ponds, mangroves, reefs and off-shore -
The Bay of Bengal exposes abundant photosynthetic picoplankton and newfound d...
This Project contains 16S rRNA Illumina paired-end sequencing data from the Bay of Bengal, collected in 2015. Please refer to PRJNA345164 for additional 16S rRNA sequencing data... -
HLII Prochlorococcus dominates Bay of Bengal phytoplankton with high abundanc...
16S v1v2 rRNA amplicon based analysis of cyanobacteria community in the Bay of Bengal. -
Metagenomic and metatranscriptomic time-series datasets from samples taken of...
In 2014, the Fuhrman lab at USC deployed a high-frequency automated environmental sampler off the coast of Southern California (about 1-2 km from Catalina Island). This project... -
particle associate seawater metagenome
particle associated MAGs from 300m depth Pacific Ocean seawater metagenome -
Guaymas Basin Sediment Metagenomic assembly
Deep-sea hydrothermal vents are hotspots for productivity and biodiversity. Thermal pyrolysis and circulation produce fluids rich in hydrocarbons and reduced compounds that... -
Antibiotic resistance in aquaculture sediment
The goal of this project is to determine the molecular mechanisms underlying the spread of antibiotic resistance at aquaculture sites. We collect marine samples mostly from... -
Microbial communities in kelp-amended sediments
In this work, we analyzed for the first time the role of bacterial communities in the biodegradation process of two fundamental biomass sources in temperate and subanctarctic... -
Gradients of bacteria in the oceanic water column reveal finely-resolved vert...
v1v2 Illumina amplicon sequence data of the 16S rRNA gene. we implemented resolved approaches for studying evolutionary relationships and bacterial vertical distributions in the... -
16S Metabarcoding of marine bacterial communities
This project examined the diversity (16S metabarcoding) of marine bacterial communities during two microcosm experiments. The communities were sampled in the bay of Brest...