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There are five species in this project, including T.rubripes, T.flavidus, T.b...
This study focused on the population genetics of five species, including T.rubripes, T.flavidus, T.bimaculatus, T.niphobles, and T.obscurus. Raw sequence reads were mapped to... -
Construction of Takifugu phylogeny
This study was aimed to construct Takifugu phylogeny using whole-genome re-sequencing data from multiple Takifugu species. We generated whole genome sequence for each of the... -
Genome Resequencing of nine Takifugu species
This project aims to explore the phylogenetic relationship and evolution history of the major Takifugu species along the coast of China. The species include Takifugu rubripes,... -
Genome-wide transcriptome analysis of brain region (ventral part of telenchep...
We compared the gene expression of ventral part of telenchephalon, hypothalamus and pituitary in grass puffer (Takifugu alboplumbeus) between the spring and neap tides during... -
Study on the sex determinining system in Takifugu niphobles
This study was aimed to understand the sex-determining region of Takifugu niphobles. We generated multiple males and females re-sequencing data to identify the male-specific... -
Gene expression analysis of sex-linked genes of Takifugu niphobles
This study was aimed to understand the gene expression of the sex-linked genes in Takifugu niphobles. We generated multiple males and females RNA-seq data to evaluate the gene... -
FishPIE: a universal phylogenetically informative exon markers set for ray-fi...
Here, we present FishPIE, a nested PCR primer set of 82 phylogenetic informative exon markers for ray-finned fish phylogenetic analysis. By testing 203 species from 31 orders of... -
Tetraodontiform fishes Raw sequence reads
Raw sequence reads for 1,114 exons for 145 individuals (141 tetraodontiforms and 4 outgroups) -
Spatial transcriptome analysis of brain region in grass puffer (Takifugu albo...
We have applied spatial transcriptomics on puffer brain using Visium Spatial Gene Expression platform (10X Genomics) to examine each genes expression level and site in the... -
Construction of chromosome scale genome of Takifugu niphobles
To construct the chromosome scale genome of Takifugu niphobles, we have generated 141X long reads on PacBio Sequel platform and 57X Illumina paired-end short reads on HiSeq 2500...