19 datasets found

Population genetics of tall- versus short-form Spartina alterniflora from salt marshes from Florida to Massachusetts USA

Raw reads from samples of danish species, sequenced with the purpose of assembling mito genomes for future references.

Reticulate evolution (resulting from interspeci?c hybridization) and hybrid genome duplication (allopolyploidy) have long been recognized as major processes generatingnew...

Soil salinity negatively affects growth and yield of most crop plants. Plants respond to salinity through physiological and biochemical adjustments that involve a coordinate...

Ecological genomics approaches have informed us about the structure of genetic diversity in natural populations that might underlie patterns in trait variation. However, we...

Evolution of 4x - 6x genome expression in Sporobolus

We used MiSeq 16S rRNA gene sequencing approach to characterize the sediment bacterial community from three distinct habitats (mudflats mangrove [Kandelia obovata]and saltmarsh...

22 Spartina alterniflora microsatellite cDNA sequences were generated by Illumina GA sequencer and assembled by software.

We compared genetic patterns and local adaptation using population genetic analyses and outlier tests in two intentionally introduced alien species in China based on restriction...

biomaterial provider: J Morris<br><hr> SPAdes preassembly<br> Decontaminated FSCR<br> Decontaminated gx<br> Zanfona<br> Accession: VSTD00000000

RNA-seq for different tissues of Spartina alterniflora, including seedling roots, stems, young leaves, mature leaves, inflorescences, mature seeds, and immature seeds.

Sporobolus alterniflorus was introduced to China to protect the coast since the 1960s . However, Sporobolus was identified as an invasive species because of its strong...

Raw Illumina reads from RNA libraries of five hexaploid spartina species

Our recently published results demonstrated a crucial role for plastid terminal oxidase (PTOX) as an alternative electron pathway in the halophyte Spartina alterniflora (S....

Our goal is to build full-length transcriptome of Spartina without de novo assembly and analyze the alternative polyadenylation and alternative splicing in combination of...

smallRNA libraries from leaves of 4 Sporobolus species sequenced with NextSeq500 (Illumina) 1x50bp

RNA-seq for Spartina alterniflora seedlings under different concentrations of NaCl

Survey of gene content at the level of transcriptome. The individual plant used for transcriptome sequencing was sampled from a natural population locating in Dongtan wetland...

Perennial species native to East-American Atlantic coast, introduced to Western Europe. cDNA libraries from roots and leaves.