3 datasets found

Keywords: Mutation

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  • Molecular dynamics data for UDG-dsDNA

    UDG-dsDNA-MD simulation. Initially, the UDG-dsDNA complex was solvated using the TIP3P water model, and 0.15 M sodium and chloride ions were added to neutralize the system....

  • Molecular dynamics data for DNA base flipping

    DNA base flipping trajectory files. Initial state is a double stranded DNA containing a thymine mutated to a uracil. Uracil is then flipped out according to a 100ns simulation....

  • OncodriveCLUST

    OncodriveCLUST is a method aimed to identify genes whose mutations are biased towards a large spatial clustering. This method is designed to exploit the feature that mutations...
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