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Notch inhibition study on developing eyes in the squid Doryteuthis pealeii
Neurogenesis, the regulation of cellular proliferation and differentiation in the developing nervous system, is the process that underlies the diversity of size and cell type... -
Comparative analysis of genome-scale, base-resolution DNA methylation profile...
We mapped DNA methylation in 580 animal species (535 vertebrates, 45 invertebrates), resulting in 2443 genome-scale, base-resolution DNA methylation profiles of primary tissue... -
A Molecular Tandem-Repeat Strategy For Elucidating Mechanical Properties of H...
We propose a new approach for the design and production of structural proteins that comprise one or more tandem copies of a single unit with distinct amorphous and crystalline... -
Cephalopoda Raw sequence reads
Transcriptomic profiling of cephalopods -
Loligo pealei RNA and DNA sequencing
We performed RNA and DNA sequencing to identify RNA editing sites in the squid Loligo pealei -
Transcriptomics of Doryteuthis pealeii muscles by RNA-Seq
Differential transcript abundance in arm keel, mantle, and nuchal retractor muscles isolated from three individual Doryteuthis pealeii squid captured near Boothbay Harbor,... -
Animal transcriptomes to advance sonogenetic tools: Doryteuthis pealeii
PacBio SMRT Sequel II RNAseq sequencing of several entire hatchlings of wild Doryteuthis pealeii hatched from egg masses laid at University of Chicago Marine Biological Laboratory. -
Doryteuthis pealeii Developing eye placode, eye and optic lobe time-course RN...
Time-course RNA-seq experiment of pooled dissected eye plocode tissue and eye and optic lobe tissue from 5 stages of development (Arnold stages 19, 21, 23, 25 and 27). Each... -
Doryteuthis pealeii Transcriptome or Gene expression
Pooled embryonic transcriptome of stages 16-27. Two individuals per stage. All from the same egg sack. -
Doryteuthis pealeii genome and transcriptome
Genomic and RNA-seq sequences from Doryteuthis pealeii used to create the Doryteuthis pealeii chromosome-scale assembly. -
Spatially regulated editing of genetic information within a squid neuron
In eukaryotic cells, with the exception of the specialized genomes of mitochondria and plastids, all genetic information is sequestered within the nucleus. This arrangement... -
Doryteuthis pealeii lens raw sequence reads
A parabolic relationship between lens radius and refractive index allows spherical lenses to escape spherical aberration. We show that in squid, evolution generated this design... -
Seawater carbonate chemistry and metabolic rate, ventilation rate and critica...
Ocean acidification is hypothesized to limit the performance of squid owing to their exceptional oxygen demand and pH sensitivity of blood–oxygen binding, which may reduce... -
Adverse effects of ocean acidification on early development of squid (Doryteu...
Anthropogenic carbon dioxide (CO2) is being absorbed into the ocean, altering seawater chemistry, with potentially negative impacts on a wide range of marine organisms. The...