64 datasets found

RRBS sequencing of 80 eastern oysters (C.virginica) collected across 4 sites known to vary in annual mean salinity.

Dermo disease, caused by the protozoan parasite Perkinsus marinus, negatively impacts wild and cultured Eastern oyster populations, yet our knowledge of the mechanistic bases...

We performed transcriptime analysis (RNA-seq) in the stony coral Crassostrea virginica treated with different nucleotide messengers produced by cGLRs. Overall design: Several...

In this study we combined reduced representation bisulfite sequencing with 3 RNA sequencing (Tag-seq) to describe two molecular phenotypes associated with dermo infection...

Using exome capture of 152 salinity-tolerance associated genes to investigate changes in allele frequencies post low salinity exposure in the Eastern oyster, Crassostrea virginica

Epigenetic modification, specifically DNA methylation, is one possible mechanism for transgenerational plasticity. Before inheritance of methylation patterns can be...

Obtaining an overview of the satDNAs in the Crassostrea virginica genome, employing short-read NGS sequencing and RepeatExplorer2 clustering

The Eastern oyster, Crassostrea virginica, provides important ecological and economical services, making it the target of restoration projects and supporting a significant...

Whole genome sequence data for F1 offspring from crosses of parents originating from 11 bays in New Brunswick, Canada that were used for the design of a high density SNP array.

De novo transcriptome assembly of the Eastern oyster (Crassostrea virginica) exposed to crude oil

The objective of this study was to evaluate the effect of the Water-Accommodated Fractions (WAF) of light oil components on the transcriptomic response of C. virginica, focused...

The American oyster Crassostrea virginica, an ecologically and economically important estuarine organism, can suffer high mortalities due to infectious diseases. The goals of...

ddradseq Crassostrea virginica Ocean Acidification

The eastern oyster (Crassostrea virginica) is a protandrous hermaphrodite of commercial importance. As with many marine invertebrates, little is known about sex determination...

The eastern oyster, Crassostrea virginica, is among the most important harvested and aquacultured estuarine species in the United States. Natural and farmed oyster populations...

We assess the physiological and transcriptomics response of C. virginica, eastern oysters, raised in common garden at two Louisiana, USA estuaries naturally differing in...

Transcriptome data of Crassostrea virginica.

Oysters are described as keystone species serving an important ecological role. As filter-feeders they help in maintaining water quality. Oyster reefs provide refuge and support...

Exome capture is an effective tool for surveying the genome for loci under selection. However, traditional methods require an annotated genome and/or transcriptome. Here, we...

In 2010, the Deepwater Horizon oil rig run by British Petroleum (BP) suffered a catastrophic failure, releasing over four million barrels of oil into the Gulf of Mexico. The oil...